Gene : AL3G45260 A. lyrata v2.1

Defline:  (1 of 1) 2.6.1.45 - Serine--glyoxylate transaminase / SGAT Genomic Order:  3293
Name:  ? AL3G45260 Secondary Identifier:  ? PAC:35941995

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLYSYN-ALA-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G45260 0.5kb upstream 0.5kb upstream 2739   true scaffold_3: 18092157-18094895 Arabidopsis lyrata
AL3G45260 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 18094396-18094895 Arabidopsis lyrata
AL3G45260 0.5kb downstream 0.5kb downstream 2739   true scaffold_3: 18091657-18094395 Arabidopsis lyrata
AL3G45260 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 18091657-18092156 Arabidopsis lyrata
AL3G45260 1.0kb upstream 1.0kb upstream 3239   true scaffold_3: 18092157-18095395 Arabidopsis lyrata
AL3G45260 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 18094396-18095395 Arabidopsis lyrata
AL3G45260 1.0kb downstream 1.0kb downstream 3239   true scaffold_3: 18091157-18094395 Arabidopsis lyrata
AL3G45260 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 18091157-18092156 Arabidopsis lyrata
AL3G45260 2.0kb upstream 2.0kb upstream 4239   true scaffold_3: 18092157-18096395 Arabidopsis lyrata
AL3G45260 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 18094396-18096395 Arabidopsis lyrata
AL3G45260 2.0kb downstream 2.0kb downstream 4239   true scaffold_3: 18090157-18094395 Arabidopsis lyrata
AL3G45260 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 18090157-18092156 Arabidopsis lyrata
AL3G45260 5.0kb upstream 5.0kb upstream 7239   true scaffold_3: 18092157-18099395 Arabidopsis lyrata
AL3G45260 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 18094396-18099395 Arabidopsis lyrata
AL3G45260 5.0kb downstream 5.0kb downstream 7239   true scaffold_3: 18087157-18094395 Arabidopsis lyrata
AL3G45260 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 18087157-18092156 Arabidopsis lyrata
AL3G45260 10.0kb upstream 10.0kb upstream 12239   true scaffold_3: 18092157-18104395 Arabidopsis lyrata
AL3G45260 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 18094396-18104395 Arabidopsis lyrata
AL3G45260 10.0kb downstream 10.0kb downstream 12239   true scaffold_3: 18082157-18094395 Arabidopsis lyrata
AL3G45260 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 18082157-18092156 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378838 5261 Brassicaceae View MSA
123836334 5264 Brassicales-Malvales View MSA
124344247 5266 SBM View MSA
124241250 5268 Malvidae View MSA
124065045 5270 Rosid View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain