Gene : AL3G43790 A. lyrata v2.1

Defline:  (1 of 3) PTHR33469:SF3 - PROTEIN ELF4-LIKE 2-RELATED Genomic Order:  3179
Name:  ? AL3G43790 Secondary Identifier:  ? PAC:35942566

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G43790 0.5kb upstream 0.5kb upstream 2792   true scaffold_3: 14697536-14700327 Arabidopsis lyrata
AL3G43790 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 14697536-14698035 Arabidopsis lyrata
AL3G43790 0.5kb downstream 0.5kb downstream 2792   true scaffold_3: 14698036-14700827 Arabidopsis lyrata
AL3G43790 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 14700328-14700827 Arabidopsis lyrata
AL3G43790 1.0kb upstream 1.0kb upstream 3292   true scaffold_3: 14697036-14700327 Arabidopsis lyrata
AL3G43790 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 14697036-14698035 Arabidopsis lyrata
AL3G43790 1.0kb downstream 1.0kb downstream 3292   true scaffold_3: 14698036-14701327 Arabidopsis lyrata
AL3G43790 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 14700328-14701327 Arabidopsis lyrata
AL3G43790 2.0kb upstream 2.0kb upstream 4292   true scaffold_3: 14696036-14700327 Arabidopsis lyrata
AL3G43790 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 14696036-14698035 Arabidopsis lyrata
AL3G43790 2.0kb downstream 2.0kb downstream 4292   true scaffold_3: 14698036-14702327 Arabidopsis lyrata
AL3G43790 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 14700328-14702327 Arabidopsis lyrata
AL3G43790 5.0kb upstream 5.0kb upstream 7292   true scaffold_3: 14693036-14700327 Arabidopsis lyrata
AL3G43790 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 14693036-14698035 Arabidopsis lyrata
AL3G43790 5.0kb downstream 5.0kb downstream 7292   true scaffold_3: 14698036-14705327 Arabidopsis lyrata
AL3G43790 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 14700328-14705327 Arabidopsis lyrata
AL3G43790 10.0kb upstream 10.0kb upstream 12292   true scaffold_3: 14688036-14700327 Arabidopsis lyrata
AL3G43790 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 14688036-14698035 Arabidopsis lyrata
AL3G43790 10.0kb downstream 10.0kb downstream 12292   true scaffold_3: 14698036-14710327 Arabidopsis lyrata
AL3G43790 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 14700328-14710327 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377035 5261 Brassicaceae View MSA
123839147 5264 Brassicales-Malvales View MSA
124350588 5266 SBM View MSA
124181101 5268 Malvidae View MSA
124072685 5270 Rosid View MSA
123743503 5271 Pentapetalae View MSA
122791915 5272 Eudicot View MSA
122044075 5273 Angiosperm View MSA
121346271 5274 Embryophyte View MSA
123426517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain