Gene : AL3G42940 A. lyrata v2.1

Defline:  (1 of 5) PF07172 - Glycine rich protein family (GRP) Genomic Order:  3112
Name:  ? AL3G42940 Secondary Identifier:  ? PAC:35941906

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G42940 0.5kb upstream 0.5kb upstream 1531   true scaffold_3: 13981189-13982719 Arabidopsis lyrata
AL3G42940 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 13981189-13981688 Arabidopsis lyrata
AL3G42940 0.5kb downstream 0.5kb downstream 1531   true scaffold_3: 13981689-13983219 Arabidopsis lyrata
AL3G42940 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 13982720-13983219 Arabidopsis lyrata
AL3G42940 1.0kb upstream 1.0kb upstream 2031   true scaffold_3: 13980689-13982719 Arabidopsis lyrata
AL3G42940 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 13980689-13981688 Arabidopsis lyrata
AL3G42940 1.0kb downstream 1.0kb downstream 2031   true scaffold_3: 13981689-13983719 Arabidopsis lyrata
AL3G42940 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 13982720-13983719 Arabidopsis lyrata
AL3G42940 2.0kb upstream 2.0kb upstream 3031   true scaffold_3: 13979689-13982719 Arabidopsis lyrata
AL3G42940 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 13979689-13981688 Arabidopsis lyrata
AL3G42940 2.0kb downstream 2.0kb downstream 3031   true scaffold_3: 13981689-13984719 Arabidopsis lyrata
AL3G42940 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 13982720-13984719 Arabidopsis lyrata
AL3G42940 5.0kb upstream 5.0kb upstream 6031   true scaffold_3: 13976689-13982719 Arabidopsis lyrata
AL3G42940 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 13976689-13981688 Arabidopsis lyrata
AL3G42940 5.0kb downstream 5.0kb downstream 6031   true scaffold_3: 13981689-13987719 Arabidopsis lyrata
AL3G42940 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 13982720-13987719 Arabidopsis lyrata
AL3G42940 10.0kb upstream 10.0kb upstream 11031   true scaffold_3: 13971689-13982719 Arabidopsis lyrata
AL3G42940 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 13971689-13981688 Arabidopsis lyrata
AL3G42940 10.0kb downstream 10.0kb downstream 11031   true scaffold_3: 13981689-13992719 Arabidopsis lyrata
AL3G42940 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 13982720-13992719 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381030 5261 Brassicaceae View MSA
123803024 5264 Brassicales-Malvales View MSA
124300166 5266 SBM View MSA
124151417 5268 Malvidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain