Gene : AL3G42900 A. lyrata v2.1
Defline:  (1 of 89) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  3108
Name:  ? AL3G42900 Secondary Identifier:  ? PAC:35940452
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G42900 0.5kb upstream 0.5kb upstream 2587   true scaffold_3: 13924759-13927345 Arabidopsis lyrata
AL3G42900 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 13924759-13925258 Arabidopsis lyrata
AL3G42900 0.5kb downstream 0.5kb downstream 2587   true scaffold_3: 13925259-13927845 Arabidopsis lyrata
AL3G42900 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 13927346-13927845 Arabidopsis lyrata
AL3G42900 1.0kb upstream 1.0kb upstream 3087   true scaffold_3: 13924259-13927345 Arabidopsis lyrata
AL3G42900 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 13924259-13925258 Arabidopsis lyrata
AL3G42900 1.0kb downstream 1.0kb downstream 3087   true scaffold_3: 13925259-13928345 Arabidopsis lyrata
AL3G42900 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 13927346-13928345 Arabidopsis lyrata
AL3G42900 2.0kb upstream 2.0kb upstream 4087   true scaffold_3: 13923259-13927345 Arabidopsis lyrata
AL3G42900 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 13923259-13925258 Arabidopsis lyrata
AL3G42900 2.0kb downstream 2.0kb downstream 4087   true scaffold_3: 13925259-13929345 Arabidopsis lyrata
AL3G42900 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 13927346-13929345 Arabidopsis lyrata
AL3G42900 5.0kb upstream 5.0kb upstream 7087   true scaffold_3: 13920259-13927345 Arabidopsis lyrata
AL3G42900 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 13920259-13925258 Arabidopsis lyrata
AL3G42900 5.0kb downstream 5.0kb downstream 7087   true scaffold_3: 13925259-13932345 Arabidopsis lyrata
AL3G42900 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 13927346-13932345 Arabidopsis lyrata
AL3G42900 10.0kb upstream 10.0kb upstream 12087   true scaffold_3: 13915259-13927345 Arabidopsis lyrata
AL3G42900 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 13915259-13925258 Arabidopsis lyrata
AL3G42900 10.0kb downstream 10.0kb downstream 12087   true scaffold_3: 13925259-13937345 Arabidopsis lyrata
AL3G42900 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 13927346-13937345 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122375875 5261 Brassicaceae View MSA
123801079 5264 Brassicales-Malvales View MSA
124298420 5266 SBM View MSA
124150069 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain