Gene : AL3G42880 A. lyrata v2.1
Defline:  (1 of 89) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  3106
Name:  ? AL3G42880 Secondary Identifier:  ? PAC:35944445
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G42880 0.5kb upstream 0.5kb upstream 5951   true scaffold_3: 13898516-13904466 Arabidopsis lyrata
AL3G42880 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 13898516-13899015 Arabidopsis lyrata
AL3G42880 0.5kb downstream 0.5kb downstream 5951   true scaffold_3: 13899016-13904966 Arabidopsis lyrata
AL3G42880 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 13904467-13904966 Arabidopsis lyrata
AL3G42880 1.0kb upstream 1.0kb upstream 6451   true scaffold_3: 13898016-13904466 Arabidopsis lyrata
AL3G42880 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 13898016-13899015 Arabidopsis lyrata
AL3G42880 1.0kb downstream 1.0kb downstream 6451   true scaffold_3: 13899016-13905466 Arabidopsis lyrata
AL3G42880 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 13904467-13905466 Arabidopsis lyrata
AL3G42880 2.0kb upstream 2.0kb upstream 7451   true scaffold_3: 13897016-13904466 Arabidopsis lyrata
AL3G42880 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 13897016-13899015 Arabidopsis lyrata
AL3G42880 2.0kb downstream 2.0kb downstream 7451   true scaffold_3: 13899016-13906466 Arabidopsis lyrata
AL3G42880 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 13904467-13906466 Arabidopsis lyrata
AL3G42880 5.0kb upstream 5.0kb upstream 10451   true scaffold_3: 13894016-13904466 Arabidopsis lyrata
AL3G42880 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 13894016-13899015 Arabidopsis lyrata
AL3G42880 5.0kb downstream 5.0kb downstream 10451   true scaffold_3: 13899016-13909466 Arabidopsis lyrata
AL3G42880 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 13904467-13909466 Arabidopsis lyrata
AL3G42880 10.0kb upstream 10.0kb upstream 15451   true scaffold_3: 13889016-13904466 Arabidopsis lyrata
AL3G42880 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 13889016-13899015 Arabidopsis lyrata
AL3G42880 10.0kb downstream 10.0kb downstream 15451   true scaffold_3: 13899016-13914466 Arabidopsis lyrata
AL3G42880 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 13904467-13914466 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495595 5273 Angiosperm View MSA
122331722 5261 Brassicaceae View MSA
123772874 5264 Brassicales-Malvales View MSA
124271380 5266 SBM View MSA
124127372 5268 Malvidae View MSA
123856226 5270 Rosid View MSA
123442166 5271 Pentapetalae View MSA
122477744 5272 Eudicot View MSA
120768959 5274 Embryophyte View MSA
122811340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain