Gene : AL3G42870 A. lyrata v2.1
Defline:  (1 of 89) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  3105
Name:  ? AL3G42870 Secondary Identifier:  ? PAC:35940565
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G42870 0.5kb upstream 0.5kb upstream 2438   true scaffold_3: 13896246-13898683 Arabidopsis lyrata
AL3G42870 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 13896246-13896745 Arabidopsis lyrata
AL3G42870 0.5kb downstream 0.5kb downstream 2438   true scaffold_3: 13896746-13899183 Arabidopsis lyrata
AL3G42870 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 13898684-13899183 Arabidopsis lyrata
AL3G42870 1.0kb upstream 1.0kb upstream 2938   true scaffold_3: 13895746-13898683 Arabidopsis lyrata
AL3G42870 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 13895746-13896745 Arabidopsis lyrata
AL3G42870 1.0kb downstream 1.0kb downstream 2938   true scaffold_3: 13896746-13899683 Arabidopsis lyrata
AL3G42870 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 13898684-13899683 Arabidopsis lyrata
AL3G42870 2.0kb upstream 2.0kb upstream 3938   true scaffold_3: 13894746-13898683 Arabidopsis lyrata
AL3G42870 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 13894746-13896745 Arabidopsis lyrata
AL3G42870 2.0kb downstream 2.0kb downstream 3938   true scaffold_3: 13896746-13900683 Arabidopsis lyrata
AL3G42870 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 13898684-13900683 Arabidopsis lyrata
AL3G42870 5.0kb upstream 5.0kb upstream 6938   true scaffold_3: 13891746-13898683 Arabidopsis lyrata
AL3G42870 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 13891746-13896745 Arabidopsis lyrata
AL3G42870 5.0kb downstream 5.0kb downstream 6938   true scaffold_3: 13896746-13903683 Arabidopsis lyrata
AL3G42870 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 13898684-13903683 Arabidopsis lyrata
AL3G42870 10.0kb upstream 10.0kb upstream 11938   true scaffold_3: 13886746-13898683 Arabidopsis lyrata
AL3G42870 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 13886746-13896745 Arabidopsis lyrata
AL3G42870 10.0kb downstream 10.0kb downstream 11938   true scaffold_3: 13896746-13908683 Arabidopsis lyrata
AL3G42870 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 13898684-13908683 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122375875 5261 Brassicaceae View MSA
123801079 5264 Brassicales-Malvales View MSA
124298420 5266 SBM View MSA
124150069 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain