Gene : AL3G43260 A. lyrata v2.1

Defline:  (1 of 2) K12662 - U4/U6 small nuclear ribonucleoprotein PRP4 (PRPF4, PRP4) Genomic Order:  3134
Name:  ? AL3G43260 Secondary Identifier:  ? PAC:35940612

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G43260 0.5kb upstream 0.5kb upstream 1621   true scaffold_3: 14239296-14240916 Arabidopsis lyrata
AL3G43260 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 14239296-14239795 Arabidopsis lyrata
AL3G43260 0.5kb downstream 0.5kb downstream 1621   true scaffold_3: 14239796-14241416 Arabidopsis lyrata
AL3G43260 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 14240917-14241416 Arabidopsis lyrata
AL3G43260 1.0kb upstream 1.0kb upstream 2121   true scaffold_3: 14238796-14240916 Arabidopsis lyrata
AL3G43260 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 14238796-14239795 Arabidopsis lyrata
AL3G43260 1.0kb downstream 1.0kb downstream 2121   true scaffold_3: 14239796-14241916 Arabidopsis lyrata
AL3G43260 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 14240917-14241916 Arabidopsis lyrata
AL3G43260 2.0kb upstream 2.0kb upstream 3121   true scaffold_3: 14237796-14240916 Arabidopsis lyrata
AL3G43260 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 14237796-14239795 Arabidopsis lyrata
AL3G43260 2.0kb downstream 2.0kb downstream 3121   true scaffold_3: 14239796-14242916 Arabidopsis lyrata
AL3G43260 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 14240917-14242916 Arabidopsis lyrata
AL3G43260 5.0kb upstream 5.0kb upstream 6121   true scaffold_3: 14234796-14240916 Arabidopsis lyrata
AL3G43260 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 14234796-14239795 Arabidopsis lyrata
AL3G43260 5.0kb downstream 5.0kb downstream 6121   true scaffold_3: 14239796-14245916 Arabidopsis lyrata
AL3G43260 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 14240917-14245916 Arabidopsis lyrata
AL3G43260 10.0kb upstream 10.0kb upstream 11121   true scaffold_3: 14229796-14240916 Arabidopsis lyrata
AL3G43260 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 14229796-14239795 Arabidopsis lyrata
AL3G43260 10.0kb downstream 10.0kb downstream 11121   true scaffold_3: 14239796-14250916 Arabidopsis lyrata
AL3G43260 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 14240917-14250916 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499477 5273 Angiosperm View MSA
122338146 5261 Brassicaceae View MSA
123778758 5264 Brassicales-Malvales View MSA
124277098 5266 SBM View MSA
124132331 5268 Malvidae View MSA
123860644 5270 Rosid View MSA
123446246 5271 Pentapetalae View MSA
122481799 5272 Eudicot View MSA
120772816 5274 Embryophyte View MSA
122815154 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain