Gene : AL3G48410 A. lyrata v2.1

Defline:  (1 of 5) K00469 - inositol oxygenase (MIOX) Genomic Order:  3555
Name:  ? AL3G48410 Secondary Identifier:  ? PAC:35941881

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-4841 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G48410 0.5kb upstream 0.5kb upstream 3146   true scaffold_3: 20853513-20856658 Arabidopsis lyrata
AL3G48410 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 20853513-20854012 Arabidopsis lyrata
AL3G48410 0.5kb downstream 0.5kb downstream 3146   true scaffold_3: 20854013-20857158 Arabidopsis lyrata
AL3G48410 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 20856659-20857158 Arabidopsis lyrata
AL3G48410 1.0kb upstream 1.0kb upstream 3646   true scaffold_3: 20853013-20856658 Arabidopsis lyrata
AL3G48410 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 20853013-20854012 Arabidopsis lyrata
AL3G48410 1.0kb downstream 1.0kb downstream 3646   true scaffold_3: 20854013-20857658 Arabidopsis lyrata
AL3G48410 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 20856659-20857658 Arabidopsis lyrata
AL3G48410 2.0kb upstream 2.0kb upstream 4646   true scaffold_3: 20852013-20856658 Arabidopsis lyrata
AL3G48410 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 20852013-20854012 Arabidopsis lyrata
AL3G48410 2.0kb downstream 2.0kb downstream 4646   true scaffold_3: 20854013-20858658 Arabidopsis lyrata
AL3G48410 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 20856659-20858658 Arabidopsis lyrata
AL3G48410 5.0kb upstream 5.0kb upstream 7646   true scaffold_3: 20849013-20856658 Arabidopsis lyrata
AL3G48410 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 20849013-20854012 Arabidopsis lyrata
AL3G48410 5.0kb downstream 5.0kb downstream 7646   true scaffold_3: 20854013-20861658 Arabidopsis lyrata
AL3G48410 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 20856659-20861658 Arabidopsis lyrata
AL3G48410 10.0kb upstream 10.0kb upstream 12646   true scaffold_3: 20844013-20856658 Arabidopsis lyrata
AL3G48410 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 20844013-20854012 Arabidopsis lyrata
AL3G48410 10.0kb downstream 10.0kb downstream 12646   true scaffold_3: 20854013-20866658 Arabidopsis lyrata
AL3G48410 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 20856659-20866658 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366447 5261 Brassicaceae View MSA
123838196 5264 Brassicales-Malvales View MSA
124340567 5266 SBM View MSA
124249980 5268 Malvidae View MSA
124067976 5270 Rosid View MSA
123743695 5271 Pentapetalae View MSA
122796011 5272 Eudicot View MSA
122042225 5273 Angiosperm View MSA
121347706 5274 Embryophyte View MSA
123428319 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain