Gene : AL3G48320 A. lyrata v2.1

Defline:  (1 of 1) PTHR23406:SF26 - NADP-DEPENDENT MALIC ENZYME 1 Genomic Order:  3546
Name:  ? AL3G48320 Secondary Identifier:  ? PAC:35942172

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUCONEO-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-241 Arabidopsis lyrata pathologic  
Alyrata PWY-7117 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G48320 0.5kb upstream 0.5kb upstream 4181   true scaffold_3: 20783683-20787863 Arabidopsis lyrata
AL3G48320 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 20783683-20784182 Arabidopsis lyrata
AL3G48320 0.5kb downstream 0.5kb downstream 4181   true scaffold_3: 20784183-20788363 Arabidopsis lyrata
AL3G48320 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 20787864-20788363 Arabidopsis lyrata
AL3G48320 1.0kb upstream 1.0kb upstream 4681   true scaffold_3: 20783183-20787863 Arabidopsis lyrata
AL3G48320 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 20783183-20784182 Arabidopsis lyrata
AL3G48320 1.0kb downstream 1.0kb downstream 4681   true scaffold_3: 20784183-20788863 Arabidopsis lyrata
AL3G48320 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 20787864-20788863 Arabidopsis lyrata
AL3G48320 2.0kb upstream 2.0kb upstream 5681   true scaffold_3: 20782183-20787863 Arabidopsis lyrata
AL3G48320 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 20782183-20784182 Arabidopsis lyrata
AL3G48320 2.0kb downstream 2.0kb downstream 5681   true scaffold_3: 20784183-20789863 Arabidopsis lyrata
AL3G48320 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 20787864-20789863 Arabidopsis lyrata
AL3G48320 5.0kb upstream 5.0kb upstream 8681   true scaffold_3: 20779183-20787863 Arabidopsis lyrata
AL3G48320 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 20779183-20784182 Arabidopsis lyrata
AL3G48320 5.0kb downstream 5.0kb downstream 8681   true scaffold_3: 20784183-20792863 Arabidopsis lyrata
AL3G48320 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 20787864-20792863 Arabidopsis lyrata
AL3G48320 10.0kb upstream 10.0kb upstream 13681   true scaffold_3: 20774183-20787863 Arabidopsis lyrata
AL3G48320 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 20774183-20784182 Arabidopsis lyrata
AL3G48320 10.0kb downstream 10.0kb downstream 13681   true scaffold_3: 20784183-20797863 Arabidopsis lyrata
AL3G48320 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 20787864-20797863 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370204 5261 Brassicaceae View MSA
123799916 5264 Brassicales-Malvales View MSA
124348788 5266 SBM View MSA
124247919 5268 Malvidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain