Gene : AL3G48380 A. lyrata v2.1
Defline:  (1 of 4) KOG1595 - CCCH-type Zn-finger protein Genomic Order:  3552
Name:  ? AL3G48380 Secondary Identifier:  ? PAC:35942913
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G48380 0.5kb upstream 0.5kb upstream 1969   true scaffold_3: 20823180-20825148 Arabidopsis lyrata
AL3G48380 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 20824649-20825148 Arabidopsis lyrata
AL3G48380 0.5kb downstream 0.5kb downstream 1969   true scaffold_3: 20822680-20824648 Arabidopsis lyrata
AL3G48380 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 20822680-20823179 Arabidopsis lyrata
AL3G48380 1.0kb upstream 1.0kb upstream 2469   true scaffold_3: 20823180-20825648 Arabidopsis lyrata
AL3G48380 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 20824649-20825648 Arabidopsis lyrata
AL3G48380 1.0kb downstream 1.0kb downstream 2469   true scaffold_3: 20822180-20824648 Arabidopsis lyrata
AL3G48380 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 20822180-20823179 Arabidopsis lyrata
AL3G48380 2.0kb upstream 2.0kb upstream 3469   true scaffold_3: 20823180-20826648 Arabidopsis lyrata
AL3G48380 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 20824649-20826648 Arabidopsis lyrata
AL3G48380 2.0kb downstream 2.0kb downstream 3469   true scaffold_3: 20821180-20824648 Arabidopsis lyrata
AL3G48380 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 20821180-20823179 Arabidopsis lyrata
AL3G48380 5.0kb upstream 5.0kb upstream 6469   true scaffold_3: 20823180-20829648 Arabidopsis lyrata
AL3G48380 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 20824649-20829648 Arabidopsis lyrata
AL3G48380 5.0kb downstream 5.0kb downstream 6469   true scaffold_3: 20818180-20824648 Arabidopsis lyrata
AL3G48380 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 20818180-20823179 Arabidopsis lyrata
AL3G48380 10.0kb upstream 10.0kb upstream 11469   true scaffold_3: 20823180-20834648 Arabidopsis lyrata
AL3G48380 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 20824649-20834648 Arabidopsis lyrata
AL3G48380 10.0kb downstream 10.0kb downstream 11469   true scaffold_3: 20813180-20824648 Arabidopsis lyrata
AL3G48380 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 20813180-20823179 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369475 5261 Brassicaceae View MSA
123841324 5264 Brassicales-Malvales View MSA
124344801 5266 SBM View MSA
124248474 5268 Malvidae View MSA
124070432 5270 Rosid View MSA
123751061 5271 Pentapetalae View MSA
122788502 5272 Eudicot View MSA
122046777 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain