Gene : AL3G46120 A. lyrata v2.1

Defline:  (1 of 3) K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49) Genomic Order:  3359
Name:  ? AL3G46120 Secondary Identifier:  ? PAC:35943504

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G46120 0.5kb upstream 0.5kb upstream 2599   true scaffold_3: 19055836-19058434 Arabidopsis lyrata
AL3G46120 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 19055836-19056335 Arabidopsis lyrata
AL3G46120 0.5kb downstream 0.5kb downstream 2599   true scaffold_3: 19056336-19058934 Arabidopsis lyrata
AL3G46120 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 19058435-19058934 Arabidopsis lyrata
AL3G46120 1.0kb upstream 1.0kb upstream 3099   true scaffold_3: 19055336-19058434 Arabidopsis lyrata
AL3G46120 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 19055336-19056335 Arabidopsis lyrata
AL3G46120 1.0kb downstream 1.0kb downstream 3099   true scaffold_3: 19056336-19059434 Arabidopsis lyrata
AL3G46120 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 19058435-19059434 Arabidopsis lyrata
AL3G46120 2.0kb upstream 2.0kb upstream 4099   true scaffold_3: 19054336-19058434 Arabidopsis lyrata
AL3G46120 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 19054336-19056335 Arabidopsis lyrata
AL3G46120 2.0kb downstream 2.0kb downstream 4099   true scaffold_3: 19056336-19060434 Arabidopsis lyrata
AL3G46120 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 19058435-19060434 Arabidopsis lyrata
AL3G46120 5.0kb upstream 5.0kb upstream 7099   true scaffold_3: 19051336-19058434 Arabidopsis lyrata
AL3G46120 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 19051336-19056335 Arabidopsis lyrata
AL3G46120 5.0kb downstream 5.0kb downstream 7099   true scaffold_3: 19056336-19063434 Arabidopsis lyrata
AL3G46120 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 19058435-19063434 Arabidopsis lyrata
AL3G46120 10.0kb upstream 10.0kb upstream 12099   true scaffold_3: 19046336-19058434 Arabidopsis lyrata
AL3G46120 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 19046336-19056335 Arabidopsis lyrata
AL3G46120 10.0kb downstream 10.0kb downstream 12099   true scaffold_3: 19056336-19068434 Arabidopsis lyrata
AL3G46120 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 19058435-19068434 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364985 5261 Brassicaceae View MSA
123827664 5264 Brassicales-Malvales View MSA
124339244 5266 SBM View MSA
124242604 5268 Malvidae View MSA
124063998 5270 Rosid View MSA
123752165 5271 Pentapetalae View MSA
122797321 5272 Eudicot View MSA
122051122 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349008 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain