Gene : AL3G46630 A. lyrata v2.1
Defline:  (1 of 5) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Genomic Order:  3401
Name:  ? AL3G46630 Secondary Identifier:  ? PAC:35941864
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G46630 0.5kb upstream 0.5kb upstream 2323   true scaffold_3: 19522963-19525285 Arabidopsis lyrata
AL3G46630 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 19522963-19523462 Arabidopsis lyrata
AL3G46630 0.5kb downstream 0.5kb downstream 2323   true scaffold_3: 19523463-19525785 Arabidopsis lyrata
AL3G46630 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 19525286-19525785 Arabidopsis lyrata
AL3G46630 1.0kb upstream 1.0kb upstream 2823   true scaffold_3: 19522463-19525285 Arabidopsis lyrata
AL3G46630 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 19522463-19523462 Arabidopsis lyrata
AL3G46630 1.0kb downstream 1.0kb downstream 2823   true scaffold_3: 19523463-19526285 Arabidopsis lyrata
AL3G46630 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 19525286-19526285 Arabidopsis lyrata
AL3G46630 2.0kb upstream 2.0kb upstream 3823   true scaffold_3: 19521463-19525285 Arabidopsis lyrata
AL3G46630 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 19521463-19523462 Arabidopsis lyrata
AL3G46630 2.0kb downstream 2.0kb downstream 3823   true scaffold_3: 19523463-19527285 Arabidopsis lyrata
AL3G46630 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 19525286-19527285 Arabidopsis lyrata
AL3G46630 5.0kb upstream 5.0kb upstream 6823   true scaffold_3: 19518463-19525285 Arabidopsis lyrata
AL3G46630 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 19518463-19523462 Arabidopsis lyrata
AL3G46630 5.0kb downstream 5.0kb downstream 6823   true scaffold_3: 19523463-19530285 Arabidopsis lyrata
AL3G46630 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 19525286-19530285 Arabidopsis lyrata
AL3G46630 10.0kb upstream 10.0kb upstream 11823   true scaffold_3: 19513463-19525285 Arabidopsis lyrata
AL3G46630 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 19513463-19523462 Arabidopsis lyrata
AL3G46630 10.0kb downstream 10.0kb downstream 11823   true scaffold_3: 19523463-19535285 Arabidopsis lyrata
AL3G46630 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 19525286-19535285 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364902 5261 Brassicaceae View MSA
123798858 5264 Brassicales-Malvales View MSA
124296441 5266 SBM View MSA
124148595 5268 Malvidae View MSA
123874558 5270 Rosid View MSA
123743282 5271 Pentapetalae View MSA
122790089 5272 Eudicot View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain