Gene : AL3G51970 A. lyrata v2.1
Defline:  (1 of 10) 2.5.1.1//2.5.1.10//2.5.1.29 - Dimethylallyltranstransferase / Prenyltransferase // (2E,6E)-farnesyl diphosphate synthase / Geranyltranstransferase // Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  3875
Name:  ? AL3G51970 Secondary Identifier:  ? PAC:35940841
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5120 Arabidopsis lyrata pathologic  
Alyrata PWY-5122 Arabidopsis lyrata pathologic  
Alyrata PWY-5123 Arabidopsis lyrata pathologic  
Alyrata PWY-5910 Arabidopsis lyrata pathologic  
Alyrata PWY-7709 Arabidopsis lyrata pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G51970 0.5kb upstream 0.5kb upstream 1663   true scaffold_3: 22930682-22932344 Arabidopsis lyrata
AL3G51970 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 22930682-22931181 Arabidopsis lyrata
AL3G51970 0.5kb downstream 0.5kb downstream 1663   true scaffold_3: 22931182-22932844 Arabidopsis lyrata
AL3G51970 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 22932345-22932844 Arabidopsis lyrata
AL3G51970 1.0kb upstream 1.0kb upstream 2163   true scaffold_3: 22930182-22932344 Arabidopsis lyrata
AL3G51970 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 22930182-22931181 Arabidopsis lyrata
AL3G51970 1.0kb downstream 1.0kb downstream 2163   true scaffold_3: 22931182-22933344 Arabidopsis lyrata
AL3G51970 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 22932345-22933344 Arabidopsis lyrata
AL3G51970 2.0kb upstream 2.0kb upstream 3163   true scaffold_3: 22929182-22932344 Arabidopsis lyrata
AL3G51970 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 22929182-22931181 Arabidopsis lyrata
AL3G51970 2.0kb downstream 2.0kb downstream 3163   true scaffold_3: 22931182-22934344 Arabidopsis lyrata
AL3G51970 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 22932345-22934344 Arabidopsis lyrata
AL3G51970 5.0kb upstream 5.0kb upstream 6163   true scaffold_3: 22926182-22932344 Arabidopsis lyrata
AL3G51970 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 22926182-22931181 Arabidopsis lyrata
AL3G51970 5.0kb downstream 5.0kb downstream 6163   true scaffold_3: 22931182-22937344 Arabidopsis lyrata
AL3G51970 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 22932345-22937344 Arabidopsis lyrata
AL3G51970 10.0kb upstream 10.0kb upstream 11163   true scaffold_3: 22921182-22932344 Arabidopsis lyrata
AL3G51970 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 22921182-22931181 Arabidopsis lyrata
AL3G51970 10.0kb downstream 10.0kb downstream 11163   true scaffold_3: 22931182-22942344 Arabidopsis lyrata
AL3G51970 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 22932345-22942344 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338844 5261 Brassicaceae View MSA
123836269 5264 Brassicales-Malvales View MSA
124351887 5266 SBM View MSA
124244046 5268 Malvidae View MSA
124051358 5270 Rosid View MSA
123745518 5271 Pentapetalae View MSA
122795597 5272 Eudicot View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain