Gene : AL3G50820 A. lyrata v2.1
Defline:  (1 of 3) K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Genomic Order:  3772
Name:  ? AL3G50820 Secondary Identifier:  ? PAC:35942021
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G50820 0.5kb upstream 0.5kb upstream 6416   true scaffold_3: 22268980-22275395 Arabidopsis lyrata
AL3G50820 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 22268980-22269479 Arabidopsis lyrata
AL3G50820 0.5kb downstream 0.5kb downstream 6416   true scaffold_3: 22269480-22275895 Arabidopsis lyrata
AL3G50820 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 22275396-22275895 Arabidopsis lyrata
AL3G50820 1.0kb upstream 1.0kb upstream 6916   true scaffold_3: 22268480-22275395 Arabidopsis lyrata
AL3G50820 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 22268480-22269479 Arabidopsis lyrata
AL3G50820 1.0kb downstream 1.0kb downstream 6916   true scaffold_3: 22269480-22276395 Arabidopsis lyrata
AL3G50820 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 22275396-22276395 Arabidopsis lyrata
AL3G50820 2.0kb upstream 2.0kb upstream 7916   true scaffold_3: 22267480-22275395 Arabidopsis lyrata
AL3G50820 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 22267480-22269479 Arabidopsis lyrata
AL3G50820 2.0kb downstream 2.0kb downstream 7916   true scaffold_3: 22269480-22277395 Arabidopsis lyrata
AL3G50820 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 22275396-22277395 Arabidopsis lyrata
AL3G50820 5.0kb upstream 5.0kb upstream 10916   true scaffold_3: 22264480-22275395 Arabidopsis lyrata
AL3G50820 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 22264480-22269479 Arabidopsis lyrata
AL3G50820 5.0kb downstream 5.0kb downstream 10916   true scaffold_3: 22269480-22280395 Arabidopsis lyrata
AL3G50820 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 22275396-22280395 Arabidopsis lyrata
AL3G50820 10.0kb upstream 10.0kb upstream 15916   true scaffold_3: 22259480-22275395 Arabidopsis lyrata
AL3G50820 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 22259480-22269479 Arabidopsis lyrata
AL3G50820 10.0kb downstream 10.0kb downstream 15916   true scaffold_3: 22269480-22285395 Arabidopsis lyrata
AL3G50820 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 22275396-22285395 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374985 5261 Brassicaceae View MSA
123828358 5264 Brassicales-Malvales View MSA
124346370 5266 SBM View MSA
124242919 5268 Malvidae View MSA
124070989 5270 Rosid View MSA
123744286 5271 Pentapetalae View MSA
122786661 5272 Eudicot View MSA
122044780 5273 Angiosperm View MSA
121345566 5274 Embryophyte View MSA
123426785 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain