Gene : AL3G49390 A. lyrata v2.1
Defline:  (1 of 70) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) Genomic Order:  3639
Name:  ? AL3G49390 Secondary Identifier:  ? PAC:35940703
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G49390 0.5kb upstream 0.5kb upstream 931   true scaffold_3: 21396307-21397237 Arabidopsis lyrata
AL3G49390 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 21396738-21397237 Arabidopsis lyrata
AL3G49390 0.5kb downstream 0.5kb downstream 931   true scaffold_3: 21395807-21396737 Arabidopsis lyrata
AL3G49390 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 21395807-21396306 Arabidopsis lyrata
AL3G49390 1.0kb upstream 1.0kb upstream 1431   true scaffold_3: 21396307-21397737 Arabidopsis lyrata
AL3G49390 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 21396738-21397737 Arabidopsis lyrata
AL3G49390 1.0kb downstream 1.0kb downstream 1431   true scaffold_3: 21395307-21396737 Arabidopsis lyrata
AL3G49390 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 21395307-21396306 Arabidopsis lyrata
AL3G49390 2.0kb upstream 2.0kb upstream 2431   true scaffold_3: 21396307-21398737 Arabidopsis lyrata
AL3G49390 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 21396738-21398737 Arabidopsis lyrata
AL3G49390 2.0kb downstream 2.0kb downstream 2431   true scaffold_3: 21394307-21396737 Arabidopsis lyrata
AL3G49390 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 21394307-21396306 Arabidopsis lyrata
AL3G49390 5.0kb upstream 5.0kb upstream 5431   true scaffold_3: 21396307-21401737 Arabidopsis lyrata
AL3G49390 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 21396738-21401737 Arabidopsis lyrata
AL3G49390 5.0kb downstream 5.0kb downstream 5431   true scaffold_3: 21391307-21396737 Arabidopsis lyrata
AL3G49390 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 21391307-21396306 Arabidopsis lyrata
AL3G49390 10.0kb upstream 10.0kb upstream 10431   true scaffold_3: 21396307-21406737 Arabidopsis lyrata
AL3G49390 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 21396738-21406737 Arabidopsis lyrata
AL3G49390 10.0kb downstream 10.0kb downstream 10431   true scaffold_3: 21386307-21396737 Arabidopsis lyrata
AL3G49390 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 21386307-21396306 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381682 5261 Brassicaceae View MSA
123803372 5264 Brassicales-Malvales View MSA
124300488 5266 SBM View MSA
124252657 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain