Gene : AL3G49800 A. lyrata v2.1
Defline:  (1 of 3) PTHR31618:SF1 - MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Genomic Order:  3676
Name:  ? AL3G49800 Secondary Identifier:  ? PAC:35941409
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G49800 0.5kb upstream 0.5kb upstream 3682   true scaffold_3: 21764387-21768068 Arabidopsis lyrata
AL3G49800 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 21767569-21768068 Arabidopsis lyrata
AL3G49800 0.5kb downstream 0.5kb downstream 3682   true scaffold_3: 21763887-21767568 Arabidopsis lyrata
AL3G49800 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 21763887-21764386 Arabidopsis lyrata
AL3G49800 1.0kb upstream 1.0kb upstream 4182   true scaffold_3: 21764387-21768568 Arabidopsis lyrata
AL3G49800 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 21767569-21768568 Arabidopsis lyrata
AL3G49800 1.0kb downstream 1.0kb downstream 4182   true scaffold_3: 21763387-21767568 Arabidopsis lyrata
AL3G49800 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 21763387-21764386 Arabidopsis lyrata
AL3G49800 2.0kb upstream 2.0kb upstream 5182   true scaffold_3: 21764387-21769568 Arabidopsis lyrata
AL3G49800 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 21767569-21769568 Arabidopsis lyrata
AL3G49800 2.0kb downstream 2.0kb downstream 5182   true scaffold_3: 21762387-21767568 Arabidopsis lyrata
AL3G49800 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 21762387-21764386 Arabidopsis lyrata
AL3G49800 5.0kb upstream 5.0kb upstream 8182   true scaffold_3: 21764387-21772568 Arabidopsis lyrata
AL3G49800 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 21767569-21772568 Arabidopsis lyrata
AL3G49800 5.0kb downstream 5.0kb downstream 8182   true scaffold_3: 21759387-21767568 Arabidopsis lyrata
AL3G49800 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 21759387-21764386 Arabidopsis lyrata
AL3G49800 10.0kb upstream 10.0kb upstream 13182   true scaffold_3: 21764387-21777568 Arabidopsis lyrata
AL3G49800 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 21767569-21777568 Arabidopsis lyrata
AL3G49800 10.0kb downstream 10.0kb downstream 13182   true scaffold_3: 21754387-21767568 Arabidopsis lyrata
AL3G49800 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 21754387-21764386 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361465 5261 Brassicaceae View MSA
123798180 5264 Brassicales-Malvales View MSA
124350022 5266 SBM View MSA
124245082 5268 Malvidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain