Gene : AL3G53560 A. lyrata v2.1
Defline:  (1 of 186) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  4020
Name:  ? AL3G53560 Secondary Identifier:  ? PAC:35941928
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G53560 0.5kb upstream 0.5kb upstream 2105   true scaffold_3: 23891365-23893469 Arabidopsis lyrata
AL3G53560 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 23891365-23891864 Arabidopsis lyrata
AL3G53560 0.5kb downstream 0.5kb downstream 2105   true scaffold_3: 23891865-23893969 Arabidopsis lyrata
AL3G53560 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 23893470-23893969 Arabidopsis lyrata
AL3G53560 1.0kb upstream 1.0kb upstream 2605   true scaffold_3: 23890865-23893469 Arabidopsis lyrata
AL3G53560 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 23890865-23891864 Arabidopsis lyrata
AL3G53560 1.0kb downstream 1.0kb downstream 2605   true scaffold_3: 23891865-23894469 Arabidopsis lyrata
AL3G53560 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 23893470-23894469 Arabidopsis lyrata
AL3G53560 2.0kb upstream 2.0kb upstream 3605   true scaffold_3: 23889865-23893469 Arabidopsis lyrata
AL3G53560 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 23889865-23891864 Arabidopsis lyrata
AL3G53560 2.0kb downstream 2.0kb downstream 3605   true scaffold_3: 23891865-23895469 Arabidopsis lyrata
AL3G53560 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 23893470-23895469 Arabidopsis lyrata
AL3G53560 5.0kb upstream 5.0kb upstream 6605   true scaffold_3: 23886865-23893469 Arabidopsis lyrata
AL3G53560 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 23886865-23891864 Arabidopsis lyrata
AL3G53560 5.0kb downstream 5.0kb downstream 6605   true scaffold_3: 23891865-23898469 Arabidopsis lyrata
AL3G53560 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 23893470-23898469 Arabidopsis lyrata
AL3G53560 10.0kb upstream 10.0kb upstream 11605   true scaffold_3: 23881865-23893469 Arabidopsis lyrata
AL3G53560 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 23881865-23891864 Arabidopsis lyrata
AL3G53560 10.0kb downstream 10.0kb downstream 11605   true scaffold_3: 23891865-23903469 Arabidopsis lyrata
AL3G53560 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 23893470-23903469 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370537 5261 Brassicaceae View MSA
123839556 5264 Brassicales-Malvales View MSA
124344392 5266 SBM View MSA
124243300 5268 Malvidae View MSA
124072342 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain