Gene : AL3G54000 A. lyrata v2.1

Defline:  (1 of 1) 2.1.2.5 - Glutamate formimidoyltransferase / Glutamate formyltransferase Genomic Order:  4058
Name:  ? AL3G54000 Secondary Identifier:  ? PAC:35941465

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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3841 Arabidopsis lyrata pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G54000 0.5kb upstream 0.5kb upstream 2236   true scaffold_3: 24063032-24065267 Arabidopsis lyrata
AL3G54000 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 24064768-24065267 Arabidopsis lyrata
AL3G54000 0.5kb downstream 0.5kb downstream 2236   true scaffold_3: 24062532-24064767 Arabidopsis lyrata
AL3G54000 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 24062532-24063031 Arabidopsis lyrata
AL3G54000 1.0kb upstream 1.0kb upstream 2736   true scaffold_3: 24063032-24065767 Arabidopsis lyrata
AL3G54000 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 24064768-24065767 Arabidopsis lyrata
AL3G54000 1.0kb downstream 1.0kb downstream 2736   true scaffold_3: 24062032-24064767 Arabidopsis lyrata
AL3G54000 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 24062032-24063031 Arabidopsis lyrata
AL3G54000 2.0kb upstream 2.0kb upstream 3736   true scaffold_3: 24063032-24066767 Arabidopsis lyrata
AL3G54000 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 24064768-24066767 Arabidopsis lyrata
AL3G54000 2.0kb downstream 2.0kb downstream 3736   true scaffold_3: 24061032-24064767 Arabidopsis lyrata
AL3G54000 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 24061032-24063031 Arabidopsis lyrata
AL3G54000 5.0kb upstream 5.0kb upstream 6736   true scaffold_3: 24063032-24069767 Arabidopsis lyrata
AL3G54000 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 24064768-24069767 Arabidopsis lyrata
AL3G54000 5.0kb downstream 5.0kb downstream 6736   true scaffold_3: 24058032-24064767 Arabidopsis lyrata
AL3G54000 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 24058032-24063031 Arabidopsis lyrata
AL3G54000 10.0kb upstream 10.0kb upstream 11736   true scaffold_3: 24063032-24074767 Arabidopsis lyrata
AL3G54000 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 24064768-24074767 Arabidopsis lyrata
AL3G54000 10.0kb downstream 10.0kb downstream 11736   true scaffold_3: 24053032-24064767 Arabidopsis lyrata
AL3G54000 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 24053032-24063031 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373883 5261 Brassicaceae View MSA
123838386 5264 Brassicales-Malvales View MSA
124347024 5266 SBM View MSA
124247002 5268 Malvidae View MSA
124070892 5270 Rosid View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain