Gene : AL3G53750 A. lyrata v2.1

Defline:  (1 of 2) PTHR31579:SF11 - EXPRESSED PROTEIN Genomic Order:  4034
Name:  ? AL3G53750 Secondary Identifier:  ? PAC:35941292

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G53750 0.5kb upstream 0.5kb upstream 2201   true scaffold_3: 23993037-23995237 Arabidopsis lyrata
AL3G53750 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 23994738-23995237 Arabidopsis lyrata
AL3G53750 0.5kb downstream 0.5kb downstream 2201   true scaffold_3: 23992537-23994737 Arabidopsis lyrata
AL3G53750 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 23992537-23993036 Arabidopsis lyrata
AL3G53750 1.0kb upstream 1.0kb upstream 2701   true scaffold_3: 23993037-23995737 Arabidopsis lyrata
AL3G53750 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 23994738-23995737 Arabidopsis lyrata
AL3G53750 1.0kb downstream 1.0kb downstream 2701   true scaffold_3: 23992037-23994737 Arabidopsis lyrata
AL3G53750 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 23992037-23993036 Arabidopsis lyrata
AL3G53750 2.0kb upstream 2.0kb upstream 3701   true scaffold_3: 23993037-23996737 Arabidopsis lyrata
AL3G53750 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 23994738-23996737 Arabidopsis lyrata
AL3G53750 2.0kb downstream 2.0kb downstream 3701   true scaffold_3: 23991037-23994737 Arabidopsis lyrata
AL3G53750 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 23991037-23993036 Arabidopsis lyrata
AL3G53750 5.0kb upstream 5.0kb upstream 6701   true scaffold_3: 23993037-23999737 Arabidopsis lyrata
AL3G53750 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 23994738-23999737 Arabidopsis lyrata
AL3G53750 5.0kb downstream 5.0kb downstream 6701   true scaffold_3: 23988037-23994737 Arabidopsis lyrata
AL3G53750 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 23988037-23993036 Arabidopsis lyrata
AL3G53750 10.0kb upstream 10.0kb upstream 11701   true scaffold_3: 23993037-24004737 Arabidopsis lyrata
AL3G53750 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 23994738-24004737 Arabidopsis lyrata
AL3G53750 10.0kb downstream 10.0kb downstream 11701   true scaffold_3: 23983037-23994737 Arabidopsis lyrata
AL3G53750 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 23983037-23993036 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362464 5261 Brassicaceae View MSA
123836127 5264 Brassicales-Malvales View MSA
124340947 5266 SBM View MSA
124246421 5268 Malvidae View MSA
124071276 5270 Rosid View MSA
123751272 5271 Pentapetalae View MSA
122785688 5272 Eudicot View MSA
122045708 5273 Angiosperm View MSA
123429021 5275 Viridiplantae View MSA
121310489 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain