Gene : AL3G52990 A. lyrata v2.1
Defline:  (1 of 6) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Genomic Order:  3965
Name:  ? AL3G52990 Secondary Identifier:  ? PAC:35942663
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G52990 0.5kb upstream 0.5kb upstream 3241   true scaffold_3: 23600120-23603360 Arabidopsis lyrata
AL3G52990 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 23600120-23600619 Arabidopsis lyrata
AL3G52990 0.5kb downstream 0.5kb downstream 3241   true scaffold_3: 23600620-23603860 Arabidopsis lyrata
AL3G52990 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 23603361-23603860 Arabidopsis lyrata
AL3G52990 1.0kb upstream 1.0kb upstream 3741   true scaffold_3: 23599620-23603360 Arabidopsis lyrata
AL3G52990 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 23599620-23600619 Arabidopsis lyrata
AL3G52990 1.0kb downstream 1.0kb downstream 3741   true scaffold_3: 23600620-23604360 Arabidopsis lyrata
AL3G52990 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 23603361-23604360 Arabidopsis lyrata
AL3G52990 2.0kb upstream 2.0kb upstream 4741   true scaffold_3: 23598620-23603360 Arabidopsis lyrata
AL3G52990 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 23598620-23600619 Arabidopsis lyrata
AL3G52990 2.0kb downstream 2.0kb downstream 4741   true scaffold_3: 23600620-23605360 Arabidopsis lyrata
AL3G52990 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 23603361-23605360 Arabidopsis lyrata
AL3G52990 5.0kb upstream 5.0kb upstream 7741   true scaffold_3: 23595620-23603360 Arabidopsis lyrata
AL3G52990 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 23595620-23600619 Arabidopsis lyrata
AL3G52990 5.0kb downstream 5.0kb downstream 7741   true scaffold_3: 23600620-23608360 Arabidopsis lyrata
AL3G52990 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 23603361-23608360 Arabidopsis lyrata
AL3G52990 10.0kb upstream 10.0kb upstream 12741   true scaffold_3: 23590620-23603360 Arabidopsis lyrata
AL3G52990 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 23590620-23600619 Arabidopsis lyrata
AL3G52990 10.0kb downstream 10.0kb downstream 12741   true scaffold_3: 23600620-23613360 Arabidopsis lyrata
AL3G52990 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 23603361-23613360 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360491 5261 Brassicaceae View MSA
123829466 5264 Brassicales-Malvales View MSA
124342808 5266 SBM View MSA
124238988 5268 Malvidae View MSA
124065938 5270 Rosid View MSA
123738887 5271 Pentapetalae View MSA
122785902 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain