Gene : AL3G53080 A. lyrata v2.1
Defline:  (1 of 4) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  3974
Name:  ? AL3G53080 Secondary Identifier:  ? PAC:35944276
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G53080 0.5kb upstream 0.5kb upstream 2340   true scaffold_3: 23665124-23667463 Arabidopsis lyrata
AL3G53080 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 23666964-23667463 Arabidopsis lyrata
AL3G53080 0.5kb downstream 0.5kb downstream 2340   true scaffold_3: 23664624-23666963 Arabidopsis lyrata
AL3G53080 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 23664624-23665123 Arabidopsis lyrata
AL3G53080 1.0kb upstream 1.0kb upstream 2840   true scaffold_3: 23665124-23667963 Arabidopsis lyrata
AL3G53080 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 23666964-23667963 Arabidopsis lyrata
AL3G53080 1.0kb downstream 1.0kb downstream 2840   true scaffold_3: 23664124-23666963 Arabidopsis lyrata
AL3G53080 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 23664124-23665123 Arabidopsis lyrata
AL3G53080 2.0kb upstream 2.0kb upstream 3840   true scaffold_3: 23665124-23668963 Arabidopsis lyrata
AL3G53080 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 23666964-23668963 Arabidopsis lyrata
AL3G53080 2.0kb downstream 2.0kb downstream 3840   true scaffold_3: 23663124-23666963 Arabidopsis lyrata
AL3G53080 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 23663124-23665123 Arabidopsis lyrata
AL3G53080 5.0kb upstream 5.0kb upstream 6840   true scaffold_3: 23665124-23671963 Arabidopsis lyrata
AL3G53080 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 23666964-23671963 Arabidopsis lyrata
AL3G53080 5.0kb downstream 5.0kb downstream 6840   true scaffold_3: 23660124-23666963 Arabidopsis lyrata
AL3G53080 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 23660124-23665123 Arabidopsis lyrata
AL3G53080 10.0kb upstream 10.0kb upstream 11840   true scaffold_3: 23665124-23676963 Arabidopsis lyrata
AL3G53080 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 23666964-23676963 Arabidopsis lyrata
AL3G53080 10.0kb downstream 10.0kb downstream 11840   true scaffold_3: 23655124-23666963 Arabidopsis lyrata
AL3G53080 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 23655124-23665123 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372484 5261 Brassicaceae View MSA
123840621 5264 Brassicales-Malvales View MSA
124346363 5266 SBM View MSA
124243646 5268 Malvidae View MSA
124050806 5270 Rosid View MSA
123751797 5271 Pentapetalae View MSA
122791749 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain