Gene : AL3G52080 A. lyrata v2.1
Defline:  (1 of 1) PTHR33133:SF5 - EXPRESSED PROTEIN Genomic Order:  3885
Name:  ? AL3G52080 Secondary Identifier:  ? PAC:35940857
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G52080 0.5kb upstream 0.5kb upstream 1701   true scaffold_3: 22972594-22974294 Arabidopsis lyrata
AL3G52080 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 22972594-22973093 Arabidopsis lyrata
AL3G52080 0.5kb downstream 0.5kb downstream 1701   true scaffold_3: 22973094-22974794 Arabidopsis lyrata
AL3G52080 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 22974295-22974794 Arabidopsis lyrata
AL3G52080 1.0kb upstream 1.0kb upstream 2201   true scaffold_3: 22972094-22974294 Arabidopsis lyrata
AL3G52080 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 22972094-22973093 Arabidopsis lyrata
AL3G52080 1.0kb downstream 1.0kb downstream 2201   true scaffold_3: 22973094-22975294 Arabidopsis lyrata
AL3G52080 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 22974295-22975294 Arabidopsis lyrata
AL3G52080 2.0kb upstream 2.0kb upstream 3201   true scaffold_3: 22971094-22974294 Arabidopsis lyrata
AL3G52080 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 22971094-22973093 Arabidopsis lyrata
AL3G52080 2.0kb downstream 2.0kb downstream 3201   true scaffold_3: 22973094-22976294 Arabidopsis lyrata
AL3G52080 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 22974295-22976294 Arabidopsis lyrata
AL3G52080 5.0kb upstream 5.0kb upstream 6201   true scaffold_3: 22968094-22974294 Arabidopsis lyrata
AL3G52080 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 22968094-22973093 Arabidopsis lyrata
AL3G52080 5.0kb downstream 5.0kb downstream 6201   true scaffold_3: 22973094-22979294 Arabidopsis lyrata
AL3G52080 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 22974295-22979294 Arabidopsis lyrata
AL3G52080 10.0kb upstream 10.0kb upstream 11201   true scaffold_3: 22963094-22974294 Arabidopsis lyrata
AL3G52080 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 22963094-22973093 Arabidopsis lyrata
AL3G52080 10.0kb downstream 10.0kb downstream 11201   true scaffold_3: 22973094-22984294 Arabidopsis lyrata
AL3G52080 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 22974295-22984294 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378206 5261 Brassicaceae View MSA
123834577 5264 Brassicales-Malvales View MSA
124344793 5266 SBM View MSA
124252340 5268 Malvidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain