Gene : AL3G52690 A. lyrata v2.1

Defline:  (1 of 2) 4.1.1.19 - Arginine decarboxylase / L-arginine carboxy-lyase Genomic Order:  3937
Name:  ? AL3G52690 Secondary Identifier:  ? PAC:35942924

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-43 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G52690 0.5kb upstream 0.5kb upstream 3176   true scaffold_3: 23379107-23382282 Arabidopsis lyrata
AL3G52690 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 23381783-23382282 Arabidopsis lyrata
AL3G52690 0.5kb downstream 0.5kb downstream 3176   true scaffold_3: 23378607-23381782 Arabidopsis lyrata
AL3G52690 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 23378607-23379106 Arabidopsis lyrata
AL3G52690 1.0kb upstream 1.0kb upstream 3676   true scaffold_3: 23379107-23382782 Arabidopsis lyrata
AL3G52690 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 23381783-23382782 Arabidopsis lyrata
AL3G52690 1.0kb downstream 1.0kb downstream 3676   true scaffold_3: 23378107-23381782 Arabidopsis lyrata
AL3G52690 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 23378107-23379106 Arabidopsis lyrata
AL3G52690 2.0kb upstream 2.0kb upstream 4676   true scaffold_3: 23379107-23383782 Arabidopsis lyrata
AL3G52690 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 23381783-23383782 Arabidopsis lyrata
AL3G52690 2.0kb downstream 2.0kb downstream 4676   true scaffold_3: 23377107-23381782 Arabidopsis lyrata
AL3G52690 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 23377107-23379106 Arabidopsis lyrata
AL3G52690 5.0kb upstream 5.0kb upstream 7676   true scaffold_3: 23379107-23386782 Arabidopsis lyrata
AL3G52690 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 23381783-23386782 Arabidopsis lyrata
AL3G52690 5.0kb downstream 5.0kb downstream 7676   true scaffold_3: 23374107-23381782 Arabidopsis lyrata
AL3G52690 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 23374107-23379106 Arabidopsis lyrata
AL3G52690 10.0kb upstream 10.0kb upstream 12676   true scaffold_3: 23379107-23391782 Arabidopsis lyrata
AL3G52690 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 23381783-23391782 Arabidopsis lyrata
AL3G52690 10.0kb downstream 10.0kb downstream 12676   true scaffold_3: 23369107-23381782 Arabidopsis lyrata
AL3G52690 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 23369107-23379106 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377883 5261 Brassicaceae View MSA
123801663 5264 Brassicales-Malvales View MSA
124298940 5266 SBM View MSA
124150472 5268 Malvidae View MSA
124064588 5270 Rosid View MSA
123739718 5271 Pentapetalae View MSA
122791004 5272 Eudicot View MSA
122046464 5273 Angiosperm View MSA
121350786 5274 Embryophyte View MSA
123424715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain