Gene : AL4G11740 A. lyrata v2.1
Defline:  (1 of 1) PTHR31573:SF1 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 Genomic Order:  155
Name:  ? AL4G11740 Secondary Identifier:  ? PAC:35922855
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G11740 0.5kb upstream 0.5kb upstream 3175   true scaffold_4: 868310-871484 Arabidopsis lyrata
AL4G11740 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 868310-868809 Arabidopsis lyrata
AL4G11740 0.5kb downstream 0.5kb downstream 3175   true scaffold_4: 868810-871984 Arabidopsis lyrata
AL4G11740 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 871485-871984 Arabidopsis lyrata
AL4G11740 1.0kb upstream 1.0kb upstream 3675   true scaffold_4: 867810-871484 Arabidopsis lyrata
AL4G11740 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 867810-868809 Arabidopsis lyrata
AL4G11740 1.0kb downstream 1.0kb downstream 3675   true scaffold_4: 868810-872484 Arabidopsis lyrata
AL4G11740 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 871485-872484 Arabidopsis lyrata
AL4G11740 2.0kb upstream 2.0kb upstream 4675   true scaffold_4: 866810-871484 Arabidopsis lyrata
AL4G11740 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 866810-868809 Arabidopsis lyrata
AL4G11740 2.0kb downstream 2.0kb downstream 4675   true scaffold_4: 868810-873484 Arabidopsis lyrata
AL4G11740 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 871485-873484 Arabidopsis lyrata
AL4G11740 5.0kb upstream 5.0kb upstream 7675   true scaffold_4: 863810-871484 Arabidopsis lyrata
AL4G11740 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 863810-868809 Arabidopsis lyrata
AL4G11740 5.0kb downstream 5.0kb downstream 7675   true scaffold_4: 868810-876484 Arabidopsis lyrata
AL4G11740 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 871485-876484 Arabidopsis lyrata
AL4G11740 10.0kb upstream 10.0kb upstream 12675   true scaffold_4: 858810-871484 Arabidopsis lyrata
AL4G11740 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 858810-868809 Arabidopsis lyrata
AL4G11740 10.0kb downstream 10.0kb downstream 12675   true scaffold_4: 868810-881484 Arabidopsis lyrata
AL4G11740 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 871485-881484 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361949 5261 Brassicaceae View MSA
123831862 5264 Brassicales-Malvales View MSA
124344004 5266 SBM View MSA
124237545 5268 Malvidae View MSA
124050829 5270 Rosid View MSA
123749996 5271 Pentapetalae View MSA
122791674 5272 Eudicot View MSA
122048951 5273 Angiosperm View MSA
121351428 5274 Embryophyte View MSA
123423770 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain