Gene : AL4G11070 A. lyrata v2.1

Defline:  (1 of 3) K10807 - ribonucleoside-diphosphate reductase subunit M1 (RRM1) Genomic Order:  95
Name:  ? AL4G11070 Secondary Identifier:  ? PAC:35922118

Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6126 Arabidopsis lyrata pathologic  
Alyrata PWY-6545 Arabidopsis lyrata pathologic  
Alyrata PWY-7184 Arabidopsis lyrata pathologic  
Alyrata PWY-7210 Arabidopsis lyrata pathologic  
Alyrata PWY-7211 Arabidopsis lyrata pathologic  
Alyrata PWY-7220 Arabidopsis lyrata pathologic  
Alyrata PWY-7222 Arabidopsis lyrata pathologic  
Alyrata PWY-7226 Arabidopsis lyrata pathologic  
Alyrata PWY-7227 Arabidopsis lyrata pathologic  
Alyrata PWY-7228 Arabidopsis lyrata pathologic  
Alyrata PWY-7229 Arabidopsis lyrata pathologic  
Alyrata PWY-841 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G11070 0.5kb upstream 0.5kb upstream 4759   true scaffold_4: 500209-504967 Arabidopsis lyrata
AL4G11070 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 500209-500708 Arabidopsis lyrata
AL4G11070 0.5kb downstream 0.5kb downstream 4759   true scaffold_4: 500709-505467 Arabidopsis lyrata
AL4G11070 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 504968-505467 Arabidopsis lyrata
AL4G11070 1.0kb upstream 1.0kb upstream 5259   true scaffold_4: 499709-504967 Arabidopsis lyrata
AL4G11070 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 499709-500708 Arabidopsis lyrata
AL4G11070 1.0kb downstream 1.0kb downstream 5259   true scaffold_4: 500709-505967 Arabidopsis lyrata
AL4G11070 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 504968-505967 Arabidopsis lyrata
AL4G11070 2.0kb upstream 2.0kb upstream 6259   true scaffold_4: 498709-504967 Arabidopsis lyrata
AL4G11070 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 498709-500708 Arabidopsis lyrata
AL4G11070 2.0kb downstream 2.0kb downstream 6259   true scaffold_4: 500709-506967 Arabidopsis lyrata
AL4G11070 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 504968-506967 Arabidopsis lyrata
AL4G11070 5.0kb upstream 5.0kb upstream 9259   true scaffold_4: 495709-504967 Arabidopsis lyrata
AL4G11070 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 495709-500708 Arabidopsis lyrata
AL4G11070 5.0kb downstream 5.0kb downstream 9259   true scaffold_4: 500709-509967 Arabidopsis lyrata
AL4G11070 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 504968-509967 Arabidopsis lyrata
AL4G11070 10.0kb upstream 10.0kb upstream 14259   true scaffold_4: 490709-504967 Arabidopsis lyrata
AL4G11070 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 490709-500708 Arabidopsis lyrata
AL4G11070 10.0kb downstream 10.0kb downstream 14259   true scaffold_4: 500709-514967 Arabidopsis lyrata
AL4G11070 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 504968-514967 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365382 5261 Brassicaceae View MSA
123834917 5264 Brassicales-Malvales View MSA
124342571 5266 SBM View MSA
124247315 5268 Malvidae View MSA
124065461 5270 Rosid View MSA
123747957 5271 Pentapetalae View MSA
122795256 5272 Eudicot View MSA
122044157 5273 Angiosperm View MSA
121347545 5274 Embryophyte View MSA
123424335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain