Gene : AL4G10470 A. lyrata v2.1

Defline:  (1 of 1) PTHR11627:SF16 - FRUCTOSE-BISPHOSPHATE ALDOLASE 1, CHLOROPLASTIC-RELATED Genomic Order:  43
Name:  ? AL4G10470 Secondary Identifier:  ? PAC:35922608

Sequence Feature Displayer

Ontology Annotation Displayer

10 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ANAEROFRUCAT-PWY Arabidopsis lyrata pathologic  
Alyrata ANAGLYCOLYSIS-PWY Arabidopsis lyrata pathologic  
Alyrata CALVIN-PWY Arabidopsis lyrata pathologic  
Alyrata GLUCONEO-PWY Arabidopsis lyrata pathologic  
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-1042 Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY66-373 Arabidopsis lyrata pathologic  
Alyrata PWY66-399 Arabidopsis lyrata pathologic  
Alyrata SUCSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G10470 0.5kb upstream 0.5kb upstream 2707   true scaffold_4: 245251-247957 Arabidopsis lyrata
AL4G10470 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 247458-247957 Arabidopsis lyrata
AL4G10470 0.5kb downstream 0.5kb downstream 2707   true scaffold_4: 244751-247457 Arabidopsis lyrata
AL4G10470 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 244751-245250 Arabidopsis lyrata
AL4G10470 1.0kb upstream 1.0kb upstream 3207   true scaffold_4: 245251-248457 Arabidopsis lyrata
AL4G10470 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 247458-248457 Arabidopsis lyrata
AL4G10470 1.0kb downstream 1.0kb downstream 3207   true scaffold_4: 244251-247457 Arabidopsis lyrata
AL4G10470 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 244251-245250 Arabidopsis lyrata
AL4G10470 2.0kb upstream 2.0kb upstream 4207   true scaffold_4: 245251-249457 Arabidopsis lyrata
AL4G10470 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 247458-249457 Arabidopsis lyrata
AL4G10470 2.0kb downstream 2.0kb downstream 4207   true scaffold_4: 243251-247457 Arabidopsis lyrata
AL4G10470 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 243251-245250 Arabidopsis lyrata
AL4G10470 5.0kb upstream 5.0kb upstream 7207   true scaffold_4: 245251-252457 Arabidopsis lyrata
AL4G10470 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 247458-252457 Arabidopsis lyrata
AL4G10470 5.0kb downstream 5.0kb downstream 7207   true scaffold_4: 240251-247457 Arabidopsis lyrata
AL4G10470 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 240251-245250 Arabidopsis lyrata
AL4G10470 10.0kb upstream 10.0kb upstream 12207   true scaffold_4: 245251-257457 Arabidopsis lyrata
AL4G10470 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 247458-257457 Arabidopsis lyrata
AL4G10470 10.0kb downstream 10.0kb downstream 12207   true scaffold_4: 235251-247457 Arabidopsis lyrata
AL4G10470 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 235251-245250 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040886 5273 Angiosperm View MSA
122379249 5261 Brassicaceae View MSA
123837241 5264 Brassicales-Malvales View MSA
124337106 5266 SBM View MSA
124250633 5268 Malvidae View MSA
124065316 5270 Rosid View MSA
123738786 5271 Pentapetalae View MSA
122796469 5272 Eudicot View MSA
121348633 5274 Embryophyte View MSA
123424623 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain