Gene : AL39U10040 A. lyrata v2.1
Defline:  (1 of 5) PTHR10168:SF57 - GLUTAREDOXIN-C13-RELATED Genomic Order:  4
Name:  ? AL39U10040 Secondary Identifier:  ? PAC:35951235
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata THIOREDOX-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL39U10040 0.5kb upstream 0.5kb upstream 1105   true scaffold_39: 14866-15970 Arabidopsis lyrata
AL39U10040 0.5kb upstream 0.5kb upstream 500   false scaffold_39: 14866-15365 Arabidopsis lyrata
AL39U10040 0.5kb downstream 0.5kb downstream 1105   true scaffold_39: 15366-16470 Arabidopsis lyrata
AL39U10040 0.5kb downstream 0.5kb downstream 500   false scaffold_39: 15971-16470 Arabidopsis lyrata
AL39U10040 1.0kb upstream 1.0kb upstream 1605   true scaffold_39: 14366-15970 Arabidopsis lyrata
AL39U10040 1.0kb upstream 1.0kb upstream 1000   false scaffold_39: 14366-15365 Arabidopsis lyrata
AL39U10040 1.0kb downstream 1.0kb downstream 1605   true scaffold_39: 15366-16970 Arabidopsis lyrata
AL39U10040 1.0kb downstream 1.0kb downstream 1000   false scaffold_39: 15971-16970 Arabidopsis lyrata
AL39U10040 2.0kb upstream 2.0kb upstream 2605   true scaffold_39: 13366-15970 Arabidopsis lyrata
AL39U10040 2.0kb upstream 2.0kb upstream 2000   false scaffold_39: 13366-15365 Arabidopsis lyrata
AL39U10040 2.0kb downstream 2.0kb downstream 2605   true scaffold_39: 15366-17970 Arabidopsis lyrata
AL39U10040 2.0kb downstream 2.0kb downstream 2000   false scaffold_39: 15971-17970 Arabidopsis lyrata
AL39U10040 5.0kb upstream 5.0kb upstream 5605   true scaffold_39: 10366-15970 Arabidopsis lyrata
AL39U10040 5.0kb upstream 5.0kb upstream 5000   false scaffold_39: 10366-15365 Arabidopsis lyrata
AL39U10040 5.0kb downstream 5.0kb downstream 5605   true scaffold_39: 15366-20970 Arabidopsis lyrata
AL39U10040 5.0kb downstream 5.0kb downstream 5000   false scaffold_39: 15971-20970 Arabidopsis lyrata
AL39U10040 10.0kb upstream 10.0kb upstream 10605   true scaffold_39: 5366-15970 Arabidopsis lyrata
AL39U10040 10.0kb upstream 10.0kb upstream 10000   false scaffold_39: 5366-15365 Arabidopsis lyrata
AL39U10040 10.0kb downstream 10.0kb downstream 10605   true scaffold_39: 15366-25970 Arabidopsis lyrata
AL39U10040 10.0kb downstream 10.0kb downstream 10000   false scaffold_39: 15971-25970 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028026 5273 Angiosperm View MSA
122372201 5261 Brassicaceae View MSA
123839290 5264 Brassicales-Malvales View MSA
124342010 5266 SBM View MSA
124253588 5268 Malvidae View MSA
124060957 5270 Rosid View MSA
123747538 5271 Pentapetalae View MSA
122788985 5272 Eudicot View MSA
121297578 5274 Embryophyte View MSA
123335620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain