Gene : AL375U10010 A. lyrata v2.1
Defline:  (1 of 4) PTHR11638//PTHR11638:SF116 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? AL375U10010 Secondary Identifier:  ? PAC:35947666
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL375U10010 0.5kb upstream 0.5kb upstream 2318   true scaffold_375: 5886-8203 Arabidopsis lyrata
AL375U10010 0.5kb upstream 0.5kb upstream 500   false scaffold_375: 5886-6385 Arabidopsis lyrata
AL375U10010 0.5kb downstream 0.5kb downstream 2318   true scaffold_375: 6386-8703 Arabidopsis lyrata
AL375U10010 0.5kb downstream 0.5kb downstream 500   false scaffold_375: 8204-8703 Arabidopsis lyrata
AL375U10010 1.0kb upstream 1.0kb upstream 2818   true scaffold_375: 5386-8203 Arabidopsis lyrata
AL375U10010 1.0kb upstream 1.0kb upstream 1000   false scaffold_375: 5386-6385 Arabidopsis lyrata
AL375U10010 1.0kb downstream 1.0kb downstream 2470   true scaffold_375: 6386-8855 Arabidopsis lyrata
AL375U10010 1.0kb downstream 1.0kb downstream 652   false scaffold_375: 8204-8855 Arabidopsis lyrata
AL375U10010 2.0kb upstream 2.0kb upstream 3818   true scaffold_375: 4386-8203 Arabidopsis lyrata
AL375U10010 2.0kb upstream 2.0kb upstream 2000   false scaffold_375: 4386-6385 Arabidopsis lyrata
AL375U10010 2.0kb downstream 2.0kb downstream 2470   true scaffold_375: 6386-8855 Arabidopsis lyrata
AL375U10010 2.0kb downstream 2.0kb downstream 652   false scaffold_375: 8204-8855 Arabidopsis lyrata
AL375U10010 5.0kb upstream 5.0kb upstream 6818   true scaffold_375: 1386-8203 Arabidopsis lyrata
AL375U10010 5.0kb upstream 5.0kb upstream 5000   false scaffold_375: 1386-6385 Arabidopsis lyrata
AL375U10010 5.0kb downstream 5.0kb downstream 2470   true scaffold_375: 6386-8855 Arabidopsis lyrata
AL375U10010 5.0kb downstream 5.0kb downstream 652   false scaffold_375: 8204-8855 Arabidopsis lyrata
AL375U10010 10.0kb upstream 10.0kb upstream 8203   true scaffold_375: 1-8203 Arabidopsis lyrata
AL375U10010 10.0kb upstream 10.0kb upstream 6385   false scaffold_375: 1-6385 Arabidopsis lyrata
AL375U10010 10.0kb downstream 10.0kb downstream 2470   true scaffold_375: 6386-8855 Arabidopsis lyrata
AL375U10010 10.0kb downstream 10.0kb downstream 652   false scaffold_375: 8204-8855 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122326482 5261 Brassicaceae Singleton cluster - no MSA
123767948 5264 Brassicales-Malvales Singleton cluster - no MSA
124266539 5266 SBM Singleton cluster - no MSA
124122911 5268 Malvidae Singleton cluster - no MSA
124072221 5270 Rosid View MSA
123747795 5271 Pentapetalae View MSA
122795236 5272 Eudicot View MSA
122050456 5273 Angiosperm View MSA
121347252 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain