Gene : AL4G13910 A. lyrata v2.1

Defline:  (1 of 1) PTHR12103:SF12 - 5'-NUCLEOTIDASE DOMAIN-CONTAINING PROTEIN DDB_G0275467 Genomic Order:  342
Name:  ? AL4G13910 Secondary Identifier:  ? PAC:35924385

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5381 Arabidopsis lyrata pathologic  
Alyrata PWY-5695 Arabidopsis lyrata pathologic  
Alyrata PWY-6596 Arabidopsis lyrata pathologic  
Alyrata PWY-6606 Arabidopsis lyrata pathologic  
Alyrata PWY-6608 Arabidopsis lyrata pathologic  
Alyrata PWY-7185 Arabidopsis lyrata pathologic  
Alyrata SALVADEHYPOX-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G13910 0.5kb upstream 0.5kb upstream 3985   true scaffold_4: 2194195-2198179 Arabidopsis lyrata
AL4G13910 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 2194195-2194694 Arabidopsis lyrata
AL4G13910 0.5kb downstream 0.5kb downstream 3985   true scaffold_4: 2194695-2198679 Arabidopsis lyrata
AL4G13910 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 2198180-2198679 Arabidopsis lyrata
AL4G13910 1.0kb upstream 1.0kb upstream 4485   true scaffold_4: 2193695-2198179 Arabidopsis lyrata
AL4G13910 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 2193695-2194694 Arabidopsis lyrata
AL4G13910 1.0kb downstream 1.0kb downstream 4485   true scaffold_4: 2194695-2199179 Arabidopsis lyrata
AL4G13910 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 2198180-2199179 Arabidopsis lyrata
AL4G13910 2.0kb upstream 2.0kb upstream 5485   true scaffold_4: 2192695-2198179 Arabidopsis lyrata
AL4G13910 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 2192695-2194694 Arabidopsis lyrata
AL4G13910 2.0kb downstream 2.0kb downstream 5485   true scaffold_4: 2194695-2200179 Arabidopsis lyrata
AL4G13910 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 2198180-2200179 Arabidopsis lyrata
AL4G13910 5.0kb upstream 5.0kb upstream 8485   true scaffold_4: 2189695-2198179 Arabidopsis lyrata
AL4G13910 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 2189695-2194694 Arabidopsis lyrata
AL4G13910 5.0kb downstream 5.0kb downstream 8485   true scaffold_4: 2194695-2203179 Arabidopsis lyrata
AL4G13910 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 2198180-2203179 Arabidopsis lyrata
AL4G13910 10.0kb upstream 10.0kb upstream 13485   true scaffold_4: 2184695-2198179 Arabidopsis lyrata
AL4G13910 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 2184695-2194694 Arabidopsis lyrata
AL4G13910 10.0kb downstream 10.0kb downstream 13485   true scaffold_4: 2194695-2208179 Arabidopsis lyrata
AL4G13910 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 2198180-2208179 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369705 5261 Brassicaceae View MSA
123828548 5264 Brassicales-Malvales View MSA
124338760 5266 SBM View MSA
124239733 5268 Malvidae View MSA
124062201 5270 Rosid View MSA
123740531 5271 Pentapetalae View MSA
122793473 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain