Gene : AL4G13990 A. lyrata v2.1

Defline:  (1 of 32) PF00069//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  350
Name:  ? AL4G13990 Secondary Identifier:  ? PAC:35921827

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G13990 0.5kb upstream 0.5kb upstream 3717   true scaffold_4: 2225784-2229500 Arabidopsis lyrata
AL4G13990 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 2229001-2229500 Arabidopsis lyrata
AL4G13990 0.5kb downstream 0.5kb downstream 3717   true scaffold_4: 2225284-2229000 Arabidopsis lyrata
AL4G13990 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 2225284-2225783 Arabidopsis lyrata
AL4G13990 1.0kb upstream 1.0kb upstream 4217   true scaffold_4: 2225784-2230000 Arabidopsis lyrata
AL4G13990 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 2229001-2230000 Arabidopsis lyrata
AL4G13990 1.0kb downstream 1.0kb downstream 4217   true scaffold_4: 2224784-2229000 Arabidopsis lyrata
AL4G13990 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 2224784-2225783 Arabidopsis lyrata
AL4G13990 2.0kb upstream 2.0kb upstream 5217   true scaffold_4: 2225784-2231000 Arabidopsis lyrata
AL4G13990 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 2229001-2231000 Arabidopsis lyrata
AL4G13990 2.0kb downstream 2.0kb downstream 5217   true scaffold_4: 2223784-2229000 Arabidopsis lyrata
AL4G13990 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 2223784-2225783 Arabidopsis lyrata
AL4G13990 5.0kb upstream 5.0kb upstream 8217   true scaffold_4: 2225784-2234000 Arabidopsis lyrata
AL4G13990 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 2229001-2234000 Arabidopsis lyrata
AL4G13990 5.0kb downstream 5.0kb downstream 8217   true scaffold_4: 2220784-2229000 Arabidopsis lyrata
AL4G13990 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 2220784-2225783 Arabidopsis lyrata
AL4G13990 10.0kb upstream 10.0kb upstream 13217   true scaffold_4: 2225784-2239000 Arabidopsis lyrata
AL4G13990 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 2229001-2239000 Arabidopsis lyrata
AL4G13990 10.0kb downstream 10.0kb downstream 13217   true scaffold_4: 2215784-2229000 Arabidopsis lyrata
AL4G13990 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 2215784-2225783 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360875 5261 Brassicaceae View MSA
123837545 5264 Brassicales-Malvales View MSA
124339832 5266 SBM View MSA
124242752 5268 Malvidae View MSA
124063050 5270 Rosid View MSA
123736921 5271 Pentapetalae View MSA
122790705 5272 Eudicot View MSA
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain