Gene : AL4G12350 A. lyrata v2.1

Defline:  (1 of 2) PTHR24326:SF252 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 Genomic Order:  211
Name:  ? AL4G12350 Secondary Identifier:  ? PAC:35923602

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G12350 0.5kb upstream 0.5kb upstream 1935   true scaffold_4: 1234724-1236658 Arabidopsis lyrata
AL4G12350 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 1236159-1236658 Arabidopsis lyrata
AL4G12350 0.5kb downstream 0.5kb downstream 1935   true scaffold_4: 1234224-1236158 Arabidopsis lyrata
AL4G12350 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 1234224-1234723 Arabidopsis lyrata
AL4G12350 1.0kb upstream 1.0kb upstream 2435   true scaffold_4: 1234724-1237158 Arabidopsis lyrata
AL4G12350 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 1236159-1237158 Arabidopsis lyrata
AL4G12350 1.0kb downstream 1.0kb downstream 2435   true scaffold_4: 1233724-1236158 Arabidopsis lyrata
AL4G12350 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 1233724-1234723 Arabidopsis lyrata
AL4G12350 2.0kb upstream 2.0kb upstream 3435   true scaffold_4: 1234724-1238158 Arabidopsis lyrata
AL4G12350 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 1236159-1238158 Arabidopsis lyrata
AL4G12350 2.0kb downstream 2.0kb downstream 3435   true scaffold_4: 1232724-1236158 Arabidopsis lyrata
AL4G12350 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 1232724-1234723 Arabidopsis lyrata
AL4G12350 5.0kb upstream 5.0kb upstream 6435   true scaffold_4: 1234724-1241158 Arabidopsis lyrata
AL4G12350 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 1236159-1241158 Arabidopsis lyrata
AL4G12350 5.0kb downstream 5.0kb downstream 6435   true scaffold_4: 1229724-1236158 Arabidopsis lyrata
AL4G12350 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 1229724-1234723 Arabidopsis lyrata
AL4G12350 10.0kb upstream 10.0kb upstream 11435   true scaffold_4: 1234724-1246158 Arabidopsis lyrata
AL4G12350 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 1236159-1246158 Arabidopsis lyrata
AL4G12350 10.0kb downstream 10.0kb downstream 11435   true scaffold_4: 1224724-1236158 Arabidopsis lyrata
AL4G12350 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 1224724-1234723 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361114 5261 Brassicaceae View MSA
123798105 5264 Brassicales-Malvales View MSA
124349854 5266 SBM View MSA
124237549 5268 Malvidae View MSA
124064901 5270 Rosid View MSA
123747506 5271 Pentapetalae View MSA
122796686 5272 Eudicot View MSA
122050134 5273 Angiosperm View MSA
121351534 5274 Embryophyte View MSA
123382211 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain