Gene : AL4G18830 A. lyrata v2.1

Defline:  (1 of 1) PTHR31561:SF2 - 3-KETOACYL-COA SYNTHASE 10 Genomic Order:  740
Name:  ? AL4G18830 Secondary Identifier:  ? PAC:35923574

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5080 Arabidopsis lyrata pathologic  
Alyrata PWY-6433 Arabidopsis lyrata pathologic  
Alyrata PWY-6598 Arabidopsis lyrata pathologic  
Alyrata PWY-7036 Arabidopsis lyrata pathologic  
Alyrata PWY-7601 Arabidopsis lyrata pathologic  
Alyrata PWY-7619 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G18830 0.5kb upstream 0.5kb upstream 2978   true scaffold_4: 6135902-6138879 Arabidopsis lyrata
AL4G18830 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 6138380-6138879 Arabidopsis lyrata
AL4G18830 0.5kb downstream 0.5kb downstream 2978   true scaffold_4: 6135402-6138379 Arabidopsis lyrata
AL4G18830 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 6135402-6135901 Arabidopsis lyrata
AL4G18830 1.0kb upstream 1.0kb upstream 3478   true scaffold_4: 6135902-6139379 Arabidopsis lyrata
AL4G18830 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 6138380-6139379 Arabidopsis lyrata
AL4G18830 1.0kb downstream 1.0kb downstream 3478   true scaffold_4: 6134902-6138379 Arabidopsis lyrata
AL4G18830 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 6134902-6135901 Arabidopsis lyrata
AL4G18830 2.0kb upstream 2.0kb upstream 4478   true scaffold_4: 6135902-6140379 Arabidopsis lyrata
AL4G18830 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 6138380-6140379 Arabidopsis lyrata
AL4G18830 2.0kb downstream 2.0kb downstream 4478   true scaffold_4: 6133902-6138379 Arabidopsis lyrata
AL4G18830 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 6133902-6135901 Arabidopsis lyrata
AL4G18830 5.0kb upstream 5.0kb upstream 7478   true scaffold_4: 6135902-6143379 Arabidopsis lyrata
AL4G18830 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 6138380-6143379 Arabidopsis lyrata
AL4G18830 5.0kb downstream 5.0kb downstream 7478   true scaffold_4: 6130902-6138379 Arabidopsis lyrata
AL4G18830 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 6130902-6135901 Arabidopsis lyrata
AL4G18830 10.0kb upstream 10.0kb upstream 12478   true scaffold_4: 6135902-6148379 Arabidopsis lyrata
AL4G18830 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 6138380-6148379 Arabidopsis lyrata
AL4G18830 10.0kb downstream 10.0kb downstream 12478   true scaffold_4: 6125902-6138379 Arabidopsis lyrata
AL4G18830 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 6125902-6135901 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365559 5261 Brassicaceae View MSA
123833929 5264 Brassicales-Malvales View MSA
124344788 5266 SBM View MSA
124251838 5268 Malvidae View MSA
124063374 5270 Rosid View MSA
123749222 5271 Pentapetalae View MSA
122793807 5272 Eudicot View MSA
122045773 5273 Angiosperm View MSA
121310500 5274 Embryophyte View MSA
123347968 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain