Gene : AL4G16210 A. lyrata v2.1

Defline:  (1 of 2) PTHR11592:SF11 - PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC-RELATED Genomic Order:  542
Name:  ? AL4G16210 Secondary Identifier:  ? PAC:35922865

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-4081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G16210 0.5kb upstream 0.5kb upstream 6478   true scaffold_4: 3671086-3677563 Arabidopsis lyrata
AL4G16210 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 3671086-3671585 Arabidopsis lyrata
AL4G16210 0.5kb downstream 0.5kb downstream 6478   true scaffold_4: 3671586-3678063 Arabidopsis lyrata
AL4G16210 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 3677564-3678063 Arabidopsis lyrata
AL4G16210 1.0kb upstream 1.0kb upstream 6978   true scaffold_4: 3670586-3677563 Arabidopsis lyrata
AL4G16210 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 3670586-3671585 Arabidopsis lyrata
AL4G16210 1.0kb downstream 1.0kb downstream 6978   true scaffold_4: 3671586-3678563 Arabidopsis lyrata
AL4G16210 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 3677564-3678563 Arabidopsis lyrata
AL4G16210 2.0kb upstream 2.0kb upstream 7978   true scaffold_4: 3669586-3677563 Arabidopsis lyrata
AL4G16210 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 3669586-3671585 Arabidopsis lyrata
AL4G16210 2.0kb downstream 2.0kb downstream 7978   true scaffold_4: 3671586-3679563 Arabidopsis lyrata
AL4G16210 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 3677564-3679563 Arabidopsis lyrata
AL4G16210 5.0kb upstream 5.0kb upstream 10978   true scaffold_4: 3666586-3677563 Arabidopsis lyrata
AL4G16210 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 3666586-3671585 Arabidopsis lyrata
AL4G16210 5.0kb downstream 5.0kb downstream 10978   true scaffold_4: 3671586-3682563 Arabidopsis lyrata
AL4G16210 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 3677564-3682563 Arabidopsis lyrata
AL4G16210 10.0kb upstream 10.0kb upstream 15978   true scaffold_4: 3661586-3677563 Arabidopsis lyrata
AL4G16210 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 3661586-3671585 Arabidopsis lyrata
AL4G16210 10.0kb downstream 10.0kb downstream 15978   true scaffold_4: 3671586-3687563 Arabidopsis lyrata
AL4G16210 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 3677564-3687563 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374017 5261 Brassicaceae View MSA
123838768 5264 Brassicales-Malvales View MSA
124342773 5266 SBM View MSA
124240030 5268 Malvidae View MSA
124063282 5270 Rosid View MSA
123740898 5271 Pentapetalae View MSA
122792011 5272 Eudicot View MSA
122046042 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain