Gene : AL4G19020 A. lyrata v2.1

Defline:  (1 of 8) PTHR27000:SF52 - LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED Genomic Order:  756
Name:  ? AL4G19020 Secondary Identifier:  ? PAC:35924741

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G19020 0.5kb upstream 0.5kb upstream 2229   true scaffold_4: 6397103-6399331 Arabidopsis lyrata
AL4G19020 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 6398832-6399331 Arabidopsis lyrata
AL4G19020 0.5kb downstream 0.5kb downstream 2229   true scaffold_4: 6396603-6398831 Arabidopsis lyrata
AL4G19020 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 6396603-6397102 Arabidopsis lyrata
AL4G19020 1.0kb upstream 1.0kb upstream 2729   true scaffold_4: 6397103-6399831 Arabidopsis lyrata
AL4G19020 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 6398832-6399831 Arabidopsis lyrata
AL4G19020 1.0kb downstream 1.0kb downstream 2729   true scaffold_4: 6396103-6398831 Arabidopsis lyrata
AL4G19020 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 6396103-6397102 Arabidopsis lyrata
AL4G19020 2.0kb upstream 2.0kb upstream 3729   true scaffold_4: 6397103-6400831 Arabidopsis lyrata
AL4G19020 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 6398832-6400831 Arabidopsis lyrata
AL4G19020 2.0kb downstream 2.0kb downstream 3729   true scaffold_4: 6395103-6398831 Arabidopsis lyrata
AL4G19020 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 6395103-6397102 Arabidopsis lyrata
AL4G19020 5.0kb upstream 5.0kb upstream 6729   true scaffold_4: 6397103-6403831 Arabidopsis lyrata
AL4G19020 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 6398832-6403831 Arabidopsis lyrata
AL4G19020 5.0kb downstream 5.0kb downstream 6729   true scaffold_4: 6392103-6398831 Arabidopsis lyrata
AL4G19020 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 6392103-6397102 Arabidopsis lyrata
AL4G19020 10.0kb upstream 10.0kb upstream 11729   true scaffold_4: 6397103-6408831 Arabidopsis lyrata
AL4G19020 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 6398832-6408831 Arabidopsis lyrata
AL4G19020 10.0kb downstream 10.0kb downstream 11729   true scaffold_4: 6387103-6398831 Arabidopsis lyrata
AL4G19020 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 6387103-6397102 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381289 5261 Brassicaceae View MSA
123831536 5264 Brassicales-Malvales View MSA
124336530 5266 SBM View MSA
124237636 5268 Malvidae View MSA
124071295 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain