Gene : AL4G19620 A. lyrata v2.1

Defline:  (1 of 1) PTHR31561:SF3 - 3-KETOACYL-COA SYNTHASE 11 Genomic Order:  798
Name:  ? AL4G19620 Secondary Identifier:  ? PAC:35921807

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5080 Arabidopsis lyrata pathologic  
Alyrata PWY-6433 Arabidopsis lyrata pathologic  
Alyrata PWY-6598 Arabidopsis lyrata pathologic  
Alyrata PWY-7036 Arabidopsis lyrata pathologic  
Alyrata PWY-7601 Arabidopsis lyrata pathologic  
Alyrata PWY-7606 Arabidopsis lyrata pathologic  
Alyrata PWY-7619 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G19620 0.5kb upstream 0.5kb upstream 2815   true scaffold_4: 9848976-9851790 Arabidopsis lyrata
AL4G19620 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 9848976-9849475 Arabidopsis lyrata
AL4G19620 0.5kb downstream 0.5kb downstream 2815   true scaffold_4: 9849476-9852290 Arabidopsis lyrata
AL4G19620 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 9851791-9852290 Arabidopsis lyrata
AL4G19620 1.0kb upstream 1.0kb upstream 3315   true scaffold_4: 9848476-9851790 Arabidopsis lyrata
AL4G19620 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 9848476-9849475 Arabidopsis lyrata
AL4G19620 1.0kb downstream 1.0kb downstream 3315   true scaffold_4: 9849476-9852790 Arabidopsis lyrata
AL4G19620 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 9851791-9852790 Arabidopsis lyrata
AL4G19620 2.0kb upstream 2.0kb upstream 4315   true scaffold_4: 9847476-9851790 Arabidopsis lyrata
AL4G19620 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 9847476-9849475 Arabidopsis lyrata
AL4G19620 2.0kb downstream 2.0kb downstream 4315   true scaffold_4: 9849476-9853790 Arabidopsis lyrata
AL4G19620 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 9851791-9853790 Arabidopsis lyrata
AL4G19620 5.0kb upstream 5.0kb upstream 7315   true scaffold_4: 9844476-9851790 Arabidopsis lyrata
AL4G19620 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 9844476-9849475 Arabidopsis lyrata
AL4G19620 5.0kb downstream 5.0kb downstream 7315   true scaffold_4: 9849476-9856790 Arabidopsis lyrata
AL4G19620 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 9851791-9856790 Arabidopsis lyrata
AL4G19620 10.0kb upstream 10.0kb upstream 12315   true scaffold_4: 9839476-9851790 Arabidopsis lyrata
AL4G19620 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 9839476-9849475 Arabidopsis lyrata
AL4G19620 10.0kb downstream 10.0kb downstream 12315   true scaffold_4: 9849476-9861790 Arabidopsis lyrata
AL4G19620 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 9851791-9861790 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367334 5261 Brassicaceae View MSA
123828554 5264 Brassicales-Malvales View MSA
124351180 5266 SBM View MSA
124246294 5268 Malvidae View MSA
124069691 5270 Rosid View MSA
123752157 5271 Pentapetalae View MSA
122789250 5272 Eudicot View MSA
122044783 5273 Angiosperm View MSA
121349296 5274 Embryophyte View MSA
123425974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain