Gene : AL4G23770 A. lyrata v2.1

Defline:  (1 of 1) K13171 - serine/arginine repetitive matrix protein 1 (SRRM1, SRM160) Genomic Order:  1156
Name:  ? AL4G23770 Secondary Identifier:  ? PAC:35922907

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G23770 0.5kb upstream 0.5kb upstream 5162   true scaffold_4: 13436151-13441312 Arabidopsis lyrata
AL4G23770 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 13436151-13436650 Arabidopsis lyrata
AL4G23770 0.5kb downstream 0.5kb downstream 5162   true scaffold_4: 13436651-13441812 Arabidopsis lyrata
AL4G23770 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 13441313-13441812 Arabidopsis lyrata
AL4G23770 1.0kb upstream 1.0kb upstream 5662   true scaffold_4: 13435651-13441312 Arabidopsis lyrata
AL4G23770 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 13435651-13436650 Arabidopsis lyrata
AL4G23770 1.0kb downstream 1.0kb downstream 5662   true scaffold_4: 13436651-13442312 Arabidopsis lyrata
AL4G23770 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 13441313-13442312 Arabidopsis lyrata
AL4G23770 2.0kb upstream 2.0kb upstream 6662   true scaffold_4: 13434651-13441312 Arabidopsis lyrata
AL4G23770 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 13434651-13436650 Arabidopsis lyrata
AL4G23770 2.0kb downstream 2.0kb downstream 6662   true scaffold_4: 13436651-13443312 Arabidopsis lyrata
AL4G23770 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 13441313-13443312 Arabidopsis lyrata
AL4G23770 5.0kb upstream 5.0kb upstream 9662   true scaffold_4: 13431651-13441312 Arabidopsis lyrata
AL4G23770 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 13431651-13436650 Arabidopsis lyrata
AL4G23770 5.0kb downstream 5.0kb downstream 9662   true scaffold_4: 13436651-13446312 Arabidopsis lyrata
AL4G23770 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 13441313-13446312 Arabidopsis lyrata
AL4G23770 10.0kb upstream 10.0kb upstream 14662   true scaffold_4: 13426651-13441312 Arabidopsis lyrata
AL4G23770 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 13426651-13436650 Arabidopsis lyrata
AL4G23770 10.0kb downstream 10.0kb downstream 14662   true scaffold_4: 13436651-13451312 Arabidopsis lyrata
AL4G23770 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 13441313-13451312 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372432 5261 Brassicaceae View MSA
123828755 5264 Brassicales-Malvales View MSA
124337162 5266 SBM View MSA
124252736 5268 Malvidae View MSA
124062879 5270 Rosid View MSA
123744487 5271 Pentapetalae View MSA
122788944 5272 Eudicot View MSA
122044269 5273 Angiosperm View MSA
121345775 5274 Embryophyte View MSA
123427375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain