Gene : AL4G23410 A. lyrata v2.1

Defline:  (1 of 1) 2.6.1.85 - Aminodeoxychorismate synthase / ADC synthase Genomic Order:  1124
Name:  ? AL4G23410 Secondary Identifier:  ? PAC:35923231

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6543 Arabidopsis lyrata pathologic  
Alyrata PWY-6612 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G23410 0.5kb upstream 0.5kb upstream 5429   true scaffold_4: 13122521-13127949 Arabidopsis lyrata
AL4G23410 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 13127450-13127949 Arabidopsis lyrata
AL4G23410 0.5kb downstream 0.5kb downstream 5429   true scaffold_4: 13122021-13127449 Arabidopsis lyrata
AL4G23410 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 13122021-13122520 Arabidopsis lyrata
AL4G23410 1.0kb upstream 1.0kb upstream 5929   true scaffold_4: 13122521-13128449 Arabidopsis lyrata
AL4G23410 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 13127450-13128449 Arabidopsis lyrata
AL4G23410 1.0kb downstream 1.0kb downstream 5929   true scaffold_4: 13121521-13127449 Arabidopsis lyrata
AL4G23410 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 13121521-13122520 Arabidopsis lyrata
AL4G23410 2.0kb upstream 2.0kb upstream 6929   true scaffold_4: 13122521-13129449 Arabidopsis lyrata
AL4G23410 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 13127450-13129449 Arabidopsis lyrata
AL4G23410 2.0kb downstream 2.0kb downstream 6929   true scaffold_4: 13120521-13127449 Arabidopsis lyrata
AL4G23410 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 13120521-13122520 Arabidopsis lyrata
AL4G23410 5.0kb upstream 5.0kb upstream 9929   true scaffold_4: 13122521-13132449 Arabidopsis lyrata
AL4G23410 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 13127450-13132449 Arabidopsis lyrata
AL4G23410 5.0kb downstream 5.0kb downstream 9929   true scaffold_4: 13117521-13127449 Arabidopsis lyrata
AL4G23410 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 13117521-13122520 Arabidopsis lyrata
AL4G23410 10.0kb upstream 10.0kb upstream 14929   true scaffold_4: 13122521-13137449 Arabidopsis lyrata
AL4G23410 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 13127450-13137449 Arabidopsis lyrata
AL4G23410 10.0kb downstream 10.0kb downstream 14929   true scaffold_4: 13112521-13127449 Arabidopsis lyrata
AL4G23410 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 13112521-13122520 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374835 5261 Brassicaceae View MSA
123834238 5264 Brassicales-Malvales View MSA
124342580 5266 SBM View MSA
124243371 5268 Malvidae View MSA
124072524 5270 Rosid View MSA
123738750 5271 Pentapetalae View MSA
122789996 5272 Eudicot View MSA
122041819 5273 Angiosperm View MSA
121349343 5274 Embryophyte View MSA
123425375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain