Gene : AL4G22220 A. lyrata v2.1

Defline:  (1 of 1) PTHR24098:SF5 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  1020
Name:  ? AL4G22220 Secondary Identifier:  ? PAC:35925394

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G22220 0.5kb upstream 0.5kb upstream 6994   true scaffold_4: 12199170-12206163 Arabidopsis lyrata
AL4G22220 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 12199170-12199669 Arabidopsis lyrata
AL4G22220 0.5kb downstream 0.5kb downstream 6994   true scaffold_4: 12199670-12206663 Arabidopsis lyrata
AL4G22220 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 12206164-12206663 Arabidopsis lyrata
AL4G22220 1.0kb upstream 1.0kb upstream 7494   true scaffold_4: 12198670-12206163 Arabidopsis lyrata
AL4G22220 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 12198670-12199669 Arabidopsis lyrata
AL4G22220 1.0kb downstream 1.0kb downstream 7494   true scaffold_4: 12199670-12207163 Arabidopsis lyrata
AL4G22220 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 12206164-12207163 Arabidopsis lyrata
AL4G22220 2.0kb upstream 2.0kb upstream 8494   true scaffold_4: 12197670-12206163 Arabidopsis lyrata
AL4G22220 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 12197670-12199669 Arabidopsis lyrata
AL4G22220 2.0kb downstream 2.0kb downstream 8494   true scaffold_4: 12199670-12208163 Arabidopsis lyrata
AL4G22220 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 12206164-12208163 Arabidopsis lyrata
AL4G22220 5.0kb upstream 5.0kb upstream 11494   true scaffold_4: 12194670-12206163 Arabidopsis lyrata
AL4G22220 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 12194670-12199669 Arabidopsis lyrata
AL4G22220 5.0kb downstream 5.0kb downstream 11494   true scaffold_4: 12199670-12211163 Arabidopsis lyrata
AL4G22220 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 12206164-12211163 Arabidopsis lyrata
AL4G22220 10.0kb upstream 10.0kb upstream 16494   true scaffold_4: 12189670-12206163 Arabidopsis lyrata
AL4G22220 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 12189670-12199669 Arabidopsis lyrata
AL4G22220 10.0kb downstream 10.0kb downstream 16494   true scaffold_4: 12199670-12216163 Arabidopsis lyrata
AL4G22220 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 12206164-12216163 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368263 5261 Brassicaceae View MSA
123840297 5264 Brassicales-Malvales View MSA
124346480 5266 SBM View MSA
124247892 5268 Malvidae View MSA
124068240 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain