Gene : AL4G26770 A. lyrata v2.1

Defline:  (1 of 2) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED Genomic Order:  1434
Name:  ? AL4G26770 Secondary Identifier:  ? PAC:35924795

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G26770 0.5kb upstream 0.5kb upstream 5418   true scaffold_4: 14894133-14899550 Arabidopsis lyrata
AL4G26770 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 14899051-14899550 Arabidopsis lyrata
AL4G26770 0.5kb downstream 0.5kb downstream 5418   true scaffold_4: 14893633-14899050 Arabidopsis lyrata
AL4G26770 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 14893633-14894132 Arabidopsis lyrata
AL4G26770 1.0kb upstream 1.0kb upstream 5918   true scaffold_4: 14894133-14900050 Arabidopsis lyrata
AL4G26770 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 14899051-14900050 Arabidopsis lyrata
AL4G26770 1.0kb downstream 1.0kb downstream 5918   true scaffold_4: 14893133-14899050 Arabidopsis lyrata
AL4G26770 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 14893133-14894132 Arabidopsis lyrata
AL4G26770 2.0kb upstream 2.0kb upstream 6918   true scaffold_4: 14894133-14901050 Arabidopsis lyrata
AL4G26770 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 14899051-14901050 Arabidopsis lyrata
AL4G26770 2.0kb downstream 2.0kb downstream 6918   true scaffold_4: 14892133-14899050 Arabidopsis lyrata
AL4G26770 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 14892133-14894132 Arabidopsis lyrata
AL4G26770 5.0kb upstream 5.0kb upstream 9918   true scaffold_4: 14894133-14904050 Arabidopsis lyrata
AL4G26770 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 14899051-14904050 Arabidopsis lyrata
AL4G26770 5.0kb downstream 5.0kb downstream 9918   true scaffold_4: 14889133-14899050 Arabidopsis lyrata
AL4G26770 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 14889133-14894132 Arabidopsis lyrata
AL4G26770 10.0kb upstream 10.0kb upstream 14918   true scaffold_4: 14894133-14909050 Arabidopsis lyrata
AL4G26770 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 14899051-14909050 Arabidopsis lyrata
AL4G26770 10.0kb downstream 10.0kb downstream 14918   true scaffold_4: 14884133-14899050 Arabidopsis lyrata
AL4G26770 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 14884133-14894132 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361785 5261 Brassicaceae View MSA
123836380 5264 Brassicales-Malvales View MSA
124348050 5266 SBM View MSA
124248365 5268 Malvidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain