Gene : AL4G26000 A. lyrata v2.1

Defline:  (1 of 1) K14455 - aspartate aminotransferase, mitochondrial (GOT2) Genomic Order:  1359
Name:  ? AL4G26000 Secondary Identifier:  ? PAC:35921817

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ASPARTATE-DEG1-PWY Arabidopsis lyrata pathologic  
Alyrata ASPARTATESYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-3001 Arabidopsis lyrata pathologic  
Alyrata PWY-7115 Arabidopsis lyrata pathologic  
Alyrata PWY-7117 Arabidopsis lyrata pathologic  
Alyrata THRESYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G26000 0.5kb upstream 0.5kb upstream 3823   true scaffold_4: 14552819-14556641 Arabidopsis lyrata
AL4G26000 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 14552819-14553318 Arabidopsis lyrata
AL4G26000 0.5kb downstream 0.5kb downstream 3823   true scaffold_4: 14553319-14557141 Arabidopsis lyrata
AL4G26000 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 14556642-14557141 Arabidopsis lyrata
AL4G26000 1.0kb upstream 1.0kb upstream 4323   true scaffold_4: 14552319-14556641 Arabidopsis lyrata
AL4G26000 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 14552319-14553318 Arabidopsis lyrata
AL4G26000 1.0kb downstream 1.0kb downstream 4323   true scaffold_4: 14553319-14557641 Arabidopsis lyrata
AL4G26000 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 14556642-14557641 Arabidopsis lyrata
AL4G26000 2.0kb upstream 2.0kb upstream 5323   true scaffold_4: 14551319-14556641 Arabidopsis lyrata
AL4G26000 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 14551319-14553318 Arabidopsis lyrata
AL4G26000 2.0kb downstream 2.0kb downstream 5323   true scaffold_4: 14553319-14558641 Arabidopsis lyrata
AL4G26000 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 14556642-14558641 Arabidopsis lyrata
AL4G26000 5.0kb upstream 5.0kb upstream 8323   true scaffold_4: 14548319-14556641 Arabidopsis lyrata
AL4G26000 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 14548319-14553318 Arabidopsis lyrata
AL4G26000 5.0kb downstream 5.0kb downstream 8323   true scaffold_4: 14553319-14561641 Arabidopsis lyrata
AL4G26000 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 14556642-14561641 Arabidopsis lyrata
AL4G26000 10.0kb upstream 10.0kb upstream 13323   true scaffold_4: 14543319-14556641 Arabidopsis lyrata
AL4G26000 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 14543319-14553318 Arabidopsis lyrata
AL4G26000 10.0kb downstream 10.0kb downstream 13323   true scaffold_4: 14553319-14566641 Arabidopsis lyrata
AL4G26000 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 14556642-14566641 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368520 5261 Brassicaceae View MSA
123839385 5264 Brassicales-Malvales View MSA
124344803 5266 SBM View MSA
124241659 5268 Malvidae View MSA
124063482 5270 Rosid View MSA
123737145 5271 Pentapetalae View MSA
122793092 5272 Eudicot View MSA
122046072 5273 Angiosperm View MSA
121344214 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain