Gene : AL4G24540 A. lyrata v2.1

Defline:  (1 of 2) 2.4.1.128 - Scopoletin glucosyltransferase Genomic Order:  1223
Name:  ? AL4G24540 Secondary Identifier:  ? PAC:35924819

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7186 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G24540 0.5kb upstream 0.5kb upstream 2182   true scaffold_4: 13730030-13732211 Arabidopsis lyrata
AL4G24540 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 13730030-13730529 Arabidopsis lyrata
AL4G24540 0.5kb downstream 0.5kb downstream 2182   true scaffold_4: 13730530-13732711 Arabidopsis lyrata
AL4G24540 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 13732212-13732711 Arabidopsis lyrata
AL4G24540 1.0kb upstream 1.0kb upstream 2682   true scaffold_4: 13729530-13732211 Arabidopsis lyrata
AL4G24540 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 13729530-13730529 Arabidopsis lyrata
AL4G24540 1.0kb downstream 1.0kb downstream 2682   true scaffold_4: 13730530-13733211 Arabidopsis lyrata
AL4G24540 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 13732212-13733211 Arabidopsis lyrata
AL4G24540 2.0kb upstream 2.0kb upstream 3682   true scaffold_4: 13728530-13732211 Arabidopsis lyrata
AL4G24540 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 13728530-13730529 Arabidopsis lyrata
AL4G24540 2.0kb downstream 2.0kb downstream 3682   true scaffold_4: 13730530-13734211 Arabidopsis lyrata
AL4G24540 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 13732212-13734211 Arabidopsis lyrata
AL4G24540 5.0kb upstream 5.0kb upstream 6682   true scaffold_4: 13725530-13732211 Arabidopsis lyrata
AL4G24540 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 13725530-13730529 Arabidopsis lyrata
AL4G24540 5.0kb downstream 5.0kb downstream 6682   true scaffold_4: 13730530-13737211 Arabidopsis lyrata
AL4G24540 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 13732212-13737211 Arabidopsis lyrata
AL4G24540 10.0kb upstream 10.0kb upstream 11682   true scaffold_4: 13720530-13732211 Arabidopsis lyrata
AL4G24540 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 13720530-13730529 Arabidopsis lyrata
AL4G24540 10.0kb downstream 10.0kb downstream 11682   true scaffold_4: 13730530-13742211 Arabidopsis lyrata
AL4G24540 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 13732212-13742211 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379743 5261 Brassicaceae View MSA
123802398 5264 Brassicales-Malvales View MSA
124299596 5266 SBM View MSA
124150969 5268 Malvidae View MSA
123876494 5270 Rosid View MSA
123749045 5271 Pentapetalae View MSA
122796791 5272 Eudicot View MSA
122049066 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain