Gene : AL4G24490 A. lyrata v2.1

Defline:  (1 of 3) PTHR11926:SF283 - UDP-GLYCOSYLTRANSFERASE 71D1-RELATED Genomic Order:  1218
Name:  ? AL4G24490 Secondary Identifier:  ? PAC:35921957

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5390 Arabidopsis lyrata pathologic  
Alyrata PWY-7055 Arabidopsis lyrata pathologic  
Alyrata PWY-7140 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G24490 0.5kb upstream 0.5kb upstream 2307   true scaffold_4: 13711663-13713969 Arabidopsis lyrata
AL4G24490 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 13711663-13712162 Arabidopsis lyrata
AL4G24490 0.5kb downstream 0.5kb downstream 2307   true scaffold_4: 13712163-13714469 Arabidopsis lyrata
AL4G24490 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 13713970-13714469 Arabidopsis lyrata
AL4G24490 1.0kb upstream 1.0kb upstream 2807   true scaffold_4: 13711163-13713969 Arabidopsis lyrata
AL4G24490 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 13711163-13712162 Arabidopsis lyrata
AL4G24490 1.0kb downstream 1.0kb downstream 2807   true scaffold_4: 13712163-13714969 Arabidopsis lyrata
AL4G24490 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 13713970-13714969 Arabidopsis lyrata
AL4G24490 2.0kb upstream 2.0kb upstream 3807   true scaffold_4: 13710163-13713969 Arabidopsis lyrata
AL4G24490 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 13710163-13712162 Arabidopsis lyrata
AL4G24490 2.0kb downstream 2.0kb downstream 3807   true scaffold_4: 13712163-13715969 Arabidopsis lyrata
AL4G24490 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 13713970-13715969 Arabidopsis lyrata
AL4G24490 5.0kb upstream 5.0kb upstream 6807   true scaffold_4: 13707163-13713969 Arabidopsis lyrata
AL4G24490 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 13707163-13712162 Arabidopsis lyrata
AL4G24490 5.0kb downstream 5.0kb downstream 6807   true scaffold_4: 13712163-13718969 Arabidopsis lyrata
AL4G24490 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 13713970-13718969 Arabidopsis lyrata
AL4G24490 10.0kb upstream 10.0kb upstream 11807   true scaffold_4: 13702163-13713969 Arabidopsis lyrata
AL4G24490 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 13702163-13712162 Arabidopsis lyrata
AL4G24490 10.0kb downstream 10.0kb downstream 11807   true scaffold_4: 13712163-13723969 Arabidopsis lyrata
AL4G24490 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 13713970-13723969 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331846 5261 Brassicaceae View MSA
123772976 5264 Brassicales-Malvales View MSA
124271480 5266 SBM View MSA
124127463 5268 Malvidae View MSA
124067865 5270 Rosid View MSA
123749045 5271 Pentapetalae View MSA
122796791 5272 Eudicot View MSA
122049066 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain