Gene : AL4G24470 A. lyrata v2.1

Defline:  (1 of 1) PTHR11236:SF14 - ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1, CHLOROPLASTIC-RELATED Genomic Order:  1216
Name:  ? AL4G24470 Secondary Identifier:  ? PAC:35922490

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata TRPSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G24470 0.5kb upstream 0.5kb upstream 3705   true scaffold_4: 13704363-13708067 Arabidopsis lyrata
AL4G24470 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 13704363-13704862 Arabidopsis lyrata
AL4G24470 0.5kb downstream 0.5kb downstream 3705   true scaffold_4: 13704863-13708567 Arabidopsis lyrata
AL4G24470 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 13708068-13708567 Arabidopsis lyrata
AL4G24470 1.0kb upstream 1.0kb upstream 4205   true scaffold_4: 13703863-13708067 Arabidopsis lyrata
AL4G24470 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 13703863-13704862 Arabidopsis lyrata
AL4G24470 1.0kb downstream 1.0kb downstream 4205   true scaffold_4: 13704863-13709067 Arabidopsis lyrata
AL4G24470 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 13708068-13709067 Arabidopsis lyrata
AL4G24470 2.0kb upstream 2.0kb upstream 5205   true scaffold_4: 13702863-13708067 Arabidopsis lyrata
AL4G24470 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 13702863-13704862 Arabidopsis lyrata
AL4G24470 2.0kb downstream 2.0kb downstream 5205   true scaffold_4: 13704863-13710067 Arabidopsis lyrata
AL4G24470 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 13708068-13710067 Arabidopsis lyrata
AL4G24470 5.0kb upstream 5.0kb upstream 8205   true scaffold_4: 13699863-13708067 Arabidopsis lyrata
AL4G24470 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 13699863-13704862 Arabidopsis lyrata
AL4G24470 5.0kb downstream 5.0kb downstream 8205   true scaffold_4: 13704863-13713067 Arabidopsis lyrata
AL4G24470 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 13708068-13713067 Arabidopsis lyrata
AL4G24470 10.0kb upstream 10.0kb upstream 13205   true scaffold_4: 13694863-13708067 Arabidopsis lyrata
AL4G24470 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 13694863-13704862 Arabidopsis lyrata
AL4G24470 10.0kb downstream 10.0kb downstream 13205   true scaffold_4: 13704863-13718067 Arabidopsis lyrata
AL4G24470 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 13708068-13718067 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373154 5261 Brassicaceae View MSA
123838470 5264 Brassicales-Malvales View MSA
124346682 5266 SBM View MSA
124240153 5268 Malvidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain