Gene : AL4G28340 A. lyrata v2.1
Defline:  (1 of 2) PTHR37173:SF1 - HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  1585
Name:  ? AL4G28340 Secondary Identifier:  ? PAC:35921879
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G28340 0.5kb upstream 0.5kb upstream 2604   true scaffold_4: 15543104-15545707 Arabidopsis lyrata
AL4G28340 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 15545208-15545707 Arabidopsis lyrata
AL4G28340 0.5kb downstream 0.5kb downstream 2604   true scaffold_4: 15542604-15545207 Arabidopsis lyrata
AL4G28340 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 15542604-15543103 Arabidopsis lyrata
AL4G28340 1.0kb upstream 1.0kb upstream 3104   true scaffold_4: 15543104-15546207 Arabidopsis lyrata
AL4G28340 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 15545208-15546207 Arabidopsis lyrata
AL4G28340 1.0kb downstream 1.0kb downstream 3104   true scaffold_4: 15542104-15545207 Arabidopsis lyrata
AL4G28340 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 15542104-15543103 Arabidopsis lyrata
AL4G28340 2.0kb upstream 2.0kb upstream 4104   true scaffold_4: 15543104-15547207 Arabidopsis lyrata
AL4G28340 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 15545208-15547207 Arabidopsis lyrata
AL4G28340 2.0kb downstream 2.0kb downstream 4104   true scaffold_4: 15541104-15545207 Arabidopsis lyrata
AL4G28340 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 15541104-15543103 Arabidopsis lyrata
AL4G28340 5.0kb upstream 5.0kb upstream 7104   true scaffold_4: 15543104-15550207 Arabidopsis lyrata
AL4G28340 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 15545208-15550207 Arabidopsis lyrata
AL4G28340 5.0kb downstream 5.0kb downstream 7104   true scaffold_4: 15538104-15545207 Arabidopsis lyrata
AL4G28340 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 15538104-15543103 Arabidopsis lyrata
AL4G28340 10.0kb upstream 10.0kb upstream 12104   true scaffold_4: 15543104-15555207 Arabidopsis lyrata
AL4G28340 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 15545208-15555207 Arabidopsis lyrata
AL4G28340 10.0kb downstream 10.0kb downstream 12104   true scaffold_4: 15533104-15545207 Arabidopsis lyrata
AL4G28340 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 15533104-15543103 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363572 5261 Brassicaceae View MSA
123834376 5264 Brassicales-Malvales View MSA
124341089 5266 SBM View MSA
124250614 5268 Malvidae View MSA
124065426 5270 Rosid View MSA
123746195 5271 Pentapetalae View MSA
122787235 5272 Eudicot View MSA
122045095 5273 Angiosperm View MSA
121345714 5274 Embryophyte View MSA
123425917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain