Gene : AL4G28200 A. lyrata v2.1

Defline:  (1 of 3) 2.7.1.137 - Phosphatidylinositol 3-kinase / Type III phosphoinositide 3-kinase Genomic Order:  1572
Name:  ? AL4G28200 Secondary Identifier:  ? PAC:35925036

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G28200 0.5kb upstream 0.5kb upstream 3433   true scaffold_4: 15498042-15501474 Arabidopsis lyrata
AL4G28200 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 15498042-15498541 Arabidopsis lyrata
AL4G28200 0.5kb downstream 0.5kb downstream 3433   true scaffold_4: 15498542-15501974 Arabidopsis lyrata
AL4G28200 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 15501475-15501974 Arabidopsis lyrata
AL4G28200 1.0kb upstream 1.0kb upstream 3933   true scaffold_4: 15497542-15501474 Arabidopsis lyrata
AL4G28200 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 15497542-15498541 Arabidopsis lyrata
AL4G28200 1.0kb downstream 1.0kb downstream 3933   true scaffold_4: 15498542-15502474 Arabidopsis lyrata
AL4G28200 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 15501475-15502474 Arabidopsis lyrata
AL4G28200 2.0kb upstream 2.0kb upstream 4933   true scaffold_4: 15496542-15501474 Arabidopsis lyrata
AL4G28200 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 15496542-15498541 Arabidopsis lyrata
AL4G28200 2.0kb downstream 2.0kb downstream 4933   true scaffold_4: 15498542-15503474 Arabidopsis lyrata
AL4G28200 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 15501475-15503474 Arabidopsis lyrata
AL4G28200 5.0kb upstream 5.0kb upstream 7933   true scaffold_4: 15493542-15501474 Arabidopsis lyrata
AL4G28200 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 15493542-15498541 Arabidopsis lyrata
AL4G28200 5.0kb downstream 5.0kb downstream 7933   true scaffold_4: 15498542-15506474 Arabidopsis lyrata
AL4G28200 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 15501475-15506474 Arabidopsis lyrata
AL4G28200 10.0kb upstream 10.0kb upstream 12933   true scaffold_4: 15488542-15501474 Arabidopsis lyrata
AL4G28200 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 15488542-15498541 Arabidopsis lyrata
AL4G28200 10.0kb downstream 10.0kb downstream 12933   true scaffold_4: 15498542-15511474 Arabidopsis lyrata
AL4G28200 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 15501475-15511474 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363696 5261 Brassicaceae View MSA
123827535 5264 Brassicales-Malvales View MSA
124346287 5266 SBM View MSA
124237580 5268 Malvidae View MSA
124072580 5270 Rosid View MSA
123738961 5271 Pentapetalae View MSA
122769939 5272 Eudicot View MSA
122042854 5273 Angiosperm View MSA
121346358 5274 Embryophyte View MSA
123428663 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain