Gene : AL4G28710 A. lyrata v2.1

Defline:  (1 of 3) 2.3.1.16 - Acetyl-CoA C-acyltransferase / Beta-ketothiolase Genomic Order:  1619
Name:  ? AL4G28710 Secondary Identifier:  ? PAC:35924335

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5136 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-6435 Arabidopsis lyrata pathologic  
Alyrata PWY-735 Arabidopsis lyrata pathologic  
Alyrata PWY-7606 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G28710 0.5kb upstream 0.5kb upstream 4092   true scaffold_4: 15692740-15696831 Arabidopsis lyrata
AL4G28710 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 15696332-15696831 Arabidopsis lyrata
AL4G28710 0.5kb downstream 0.5kb downstream 4092   true scaffold_4: 15692240-15696331 Arabidopsis lyrata
AL4G28710 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 15692240-15692739 Arabidopsis lyrata
AL4G28710 1.0kb upstream 1.0kb upstream 4592   true scaffold_4: 15692740-15697331 Arabidopsis lyrata
AL4G28710 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 15696332-15697331 Arabidopsis lyrata
AL4G28710 1.0kb downstream 1.0kb downstream 4592   true scaffold_4: 15691740-15696331 Arabidopsis lyrata
AL4G28710 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 15691740-15692739 Arabidopsis lyrata
AL4G28710 2.0kb upstream 2.0kb upstream 5592   true scaffold_4: 15692740-15698331 Arabidopsis lyrata
AL4G28710 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 15696332-15698331 Arabidopsis lyrata
AL4G28710 2.0kb downstream 2.0kb downstream 5592   true scaffold_4: 15690740-15696331 Arabidopsis lyrata
AL4G28710 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 15690740-15692739 Arabidopsis lyrata
AL4G28710 5.0kb upstream 5.0kb upstream 8592   true scaffold_4: 15692740-15701331 Arabidopsis lyrata
AL4G28710 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 15696332-15701331 Arabidopsis lyrata
AL4G28710 5.0kb downstream 5.0kb downstream 8592   true scaffold_4: 15687740-15696331 Arabidopsis lyrata
AL4G28710 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 15687740-15692739 Arabidopsis lyrata
AL4G28710 10.0kb upstream 10.0kb upstream 13592   true scaffold_4: 15692740-15706331 Arabidopsis lyrata
AL4G28710 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 15696332-15706331 Arabidopsis lyrata
AL4G28710 10.0kb downstream 10.0kb downstream 13592   true scaffold_4: 15682740-15696331 Arabidopsis lyrata
AL4G28710 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 15682740-15692739 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376255 5261 Brassicaceae View MSA
123828476 5264 Brassicales-Malvales View MSA
124344876 5266 SBM View MSA
124242182 5268 Malvidae View MSA
124065110 5270 Rosid View MSA
123750766 5271 Pentapetalae View MSA
122786071 5272 Eudicot View MSA
122045703 5273 Angiosperm View MSA
121347485 5274 Embryophyte View MSA
123424542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain