Gene : AL4G28470 A. lyrata v2.1

Defline:  (1 of 1) PTHR22847:SF451 - E3 UBIQUITIN-PROTEIN LIGASE RFWD2 Genomic Order:  1598
Name:  ? AL4G28470 Secondary Identifier:  ? PAC:35923725

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G28470 0.5kb upstream 0.5kb upstream 6165   true scaffold_4: 15601182-15607346 Arabidopsis lyrata
AL4G28470 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 15601182-15601681 Arabidopsis lyrata
AL4G28470 0.5kb downstream 0.5kb downstream 6165   true scaffold_4: 15601682-15607846 Arabidopsis lyrata
AL4G28470 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 15607347-15607846 Arabidopsis lyrata
AL4G28470 1.0kb upstream 1.0kb upstream 6665   true scaffold_4: 15600682-15607346 Arabidopsis lyrata
AL4G28470 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 15600682-15601681 Arabidopsis lyrata
AL4G28470 1.0kb downstream 1.0kb downstream 6665   true scaffold_4: 15601682-15608346 Arabidopsis lyrata
AL4G28470 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 15607347-15608346 Arabidopsis lyrata
AL4G28470 2.0kb upstream 2.0kb upstream 7665   true scaffold_4: 15599682-15607346 Arabidopsis lyrata
AL4G28470 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 15599682-15601681 Arabidopsis lyrata
AL4G28470 2.0kb downstream 2.0kb downstream 7665   true scaffold_4: 15601682-15609346 Arabidopsis lyrata
AL4G28470 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 15607347-15609346 Arabidopsis lyrata
AL4G28470 5.0kb upstream 5.0kb upstream 10665   true scaffold_4: 15596682-15607346 Arabidopsis lyrata
AL4G28470 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 15596682-15601681 Arabidopsis lyrata
AL4G28470 5.0kb downstream 5.0kb downstream 10665   true scaffold_4: 15601682-15612346 Arabidopsis lyrata
AL4G28470 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 15607347-15612346 Arabidopsis lyrata
AL4G28470 10.0kb upstream 10.0kb upstream 15665   true scaffold_4: 15591682-15607346 Arabidopsis lyrata
AL4G28470 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 15591682-15601681 Arabidopsis lyrata
AL4G28470 10.0kb downstream 10.0kb downstream 15665   true scaffold_4: 15601682-15617346 Arabidopsis lyrata
AL4G28470 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 15607347-15617346 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364675 5261 Brassicaceae View MSA
123832054 5264 Brassicales-Malvales View MSA
124341887 5266 SBM View MSA
124240540 5268 Malvidae View MSA
124074253 5270 Rosid View MSA
123741862 5271 Pentapetalae View MSA
122790393 5272 Eudicot View MSA
122044386 5273 Angiosperm View MSA
121345400 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain