Gene : AL4G31440 A. lyrata v2.1

Defline:  (1 of 3) K00948 - ribose-phosphate pyrophosphokinase (PRPS, prsA) Genomic Order:  1863
Name:  ? AL4G31440 Secondary Identifier:  ? PAC:35923332

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-662 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G31440 0.5kb upstream 0.5kb upstream 2990   true scaffold_4: 16807063-16810052 Arabidopsis lyrata
AL4G31440 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 16809553-16810052 Arabidopsis lyrata
AL4G31440 0.5kb downstream 0.5kb downstream 2990   true scaffold_4: 16806563-16809552 Arabidopsis lyrata
AL4G31440 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 16806563-16807062 Arabidopsis lyrata
AL4G31440 1.0kb upstream 1.0kb upstream 3490   true scaffold_4: 16807063-16810552 Arabidopsis lyrata
AL4G31440 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 16809553-16810552 Arabidopsis lyrata
AL4G31440 1.0kb downstream 1.0kb downstream 3490   true scaffold_4: 16806063-16809552 Arabidopsis lyrata
AL4G31440 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 16806063-16807062 Arabidopsis lyrata
AL4G31440 2.0kb upstream 2.0kb upstream 4490   true scaffold_4: 16807063-16811552 Arabidopsis lyrata
AL4G31440 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 16809553-16811552 Arabidopsis lyrata
AL4G31440 2.0kb downstream 2.0kb downstream 4490   true scaffold_4: 16805063-16809552 Arabidopsis lyrata
AL4G31440 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 16805063-16807062 Arabidopsis lyrata
AL4G31440 5.0kb upstream 5.0kb upstream 7490   true scaffold_4: 16807063-16814552 Arabidopsis lyrata
AL4G31440 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 16809553-16814552 Arabidopsis lyrata
AL4G31440 5.0kb downstream 5.0kb downstream 7490   true scaffold_4: 16802063-16809552 Arabidopsis lyrata
AL4G31440 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 16802063-16807062 Arabidopsis lyrata
AL4G31440 10.0kb upstream 10.0kb upstream 12490   true scaffold_4: 16807063-16819552 Arabidopsis lyrata
AL4G31440 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 16809553-16819552 Arabidopsis lyrata
AL4G31440 10.0kb downstream 10.0kb downstream 12490   true scaffold_4: 16797063-16809552 Arabidopsis lyrata
AL4G31440 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 16797063-16807062 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371418 5261 Brassicaceae View MSA
123839095 5264 Brassicales-Malvales View MSA
124346548 5266 SBM View MSA
124240392 5268 Malvidae View MSA
124060795 5270 Rosid View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain