Gene : AL4G32190 A. lyrata v2.1

Defline:  (1 of 4) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  1938
Name:  ? AL4G32190 Secondary Identifier:  ? PAC:35922557

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G32190 0.5kb upstream 0.5kb upstream 1585   true scaffold_4: 17135069-17136653 Arabidopsis lyrata
AL4G32190 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 17136154-17136653 Arabidopsis lyrata
AL4G32190 0.5kb downstream 0.5kb downstream 1585   true scaffold_4: 17134569-17136153 Arabidopsis lyrata
AL4G32190 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 17134569-17135068 Arabidopsis lyrata
AL4G32190 1.0kb upstream 1.0kb upstream 2085   true scaffold_4: 17135069-17137153 Arabidopsis lyrata
AL4G32190 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 17136154-17137153 Arabidopsis lyrata
AL4G32190 1.0kb downstream 1.0kb downstream 2085   true scaffold_4: 17134069-17136153 Arabidopsis lyrata
AL4G32190 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 17134069-17135068 Arabidopsis lyrata
AL4G32190 2.0kb upstream 2.0kb upstream 3085   true scaffold_4: 17135069-17138153 Arabidopsis lyrata
AL4G32190 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 17136154-17138153 Arabidopsis lyrata
AL4G32190 2.0kb downstream 2.0kb downstream 3085   true scaffold_4: 17133069-17136153 Arabidopsis lyrata
AL4G32190 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 17133069-17135068 Arabidopsis lyrata
AL4G32190 5.0kb upstream 5.0kb upstream 6085   true scaffold_4: 17135069-17141153 Arabidopsis lyrata
AL4G32190 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 17136154-17141153 Arabidopsis lyrata
AL4G32190 5.0kb downstream 5.0kb downstream 6085   true scaffold_4: 17130069-17136153 Arabidopsis lyrata
AL4G32190 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 17130069-17135068 Arabidopsis lyrata
AL4G32190 10.0kb upstream 10.0kb upstream 11085   true scaffold_4: 17135069-17146153 Arabidopsis lyrata
AL4G32190 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 17136154-17146153 Arabidopsis lyrata
AL4G32190 10.0kb downstream 10.0kb downstream 11085   true scaffold_4: 17125069-17136153 Arabidopsis lyrata
AL4G32190 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 17125069-17135068 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360171 5261 Brassicaceae View MSA
123797902 5264 Brassicales-Malvales View MSA
124295601 5266 SBM View MSA
124147993 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain