Gene : AL4G32330 A. lyrata v2.1

Defline:  (1 of 1) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Genomic Order:  1950
Name:  ? AL4G32330 Secondary Identifier:  ? PAC:35923365

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata HISTSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G32330 0.5kb upstream 0.5kb upstream 2436   true scaffold_4: 17176268-17178703 Arabidopsis lyrata
AL4G32330 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 17178204-17178703 Arabidopsis lyrata
AL4G32330 0.5kb downstream 0.5kb downstream 2436   true scaffold_4: 17175768-17178203 Arabidopsis lyrata
AL4G32330 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 17175768-17176267 Arabidopsis lyrata
AL4G32330 1.0kb upstream 1.0kb upstream 2936   true scaffold_4: 17176268-17179203 Arabidopsis lyrata
AL4G32330 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 17178204-17179203 Arabidopsis lyrata
AL4G32330 1.0kb downstream 1.0kb downstream 2936   true scaffold_4: 17175268-17178203 Arabidopsis lyrata
AL4G32330 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 17175268-17176267 Arabidopsis lyrata
AL4G32330 2.0kb upstream 2.0kb upstream 3936   true scaffold_4: 17176268-17180203 Arabidopsis lyrata
AL4G32330 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 17178204-17180203 Arabidopsis lyrata
AL4G32330 2.0kb downstream 2.0kb downstream 3936   true scaffold_4: 17174268-17178203 Arabidopsis lyrata
AL4G32330 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 17174268-17176267 Arabidopsis lyrata
AL4G32330 5.0kb upstream 5.0kb upstream 6936   true scaffold_4: 17176268-17183203 Arabidopsis lyrata
AL4G32330 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 17178204-17183203 Arabidopsis lyrata
AL4G32330 5.0kb downstream 5.0kb downstream 6936   true scaffold_4: 17171268-17178203 Arabidopsis lyrata
AL4G32330 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 17171268-17176267 Arabidopsis lyrata
AL4G32330 10.0kb upstream 10.0kb upstream 11936   true scaffold_4: 17176268-17188203 Arabidopsis lyrata
AL4G32330 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 17178204-17188203 Arabidopsis lyrata
AL4G32330 10.0kb downstream 10.0kb downstream 11936   true scaffold_4: 17166268-17178203 Arabidopsis lyrata
AL4G32330 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 17166268-17176267 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
122376497 5261 Brassicaceae View MSA
123835580 5264 Brassicales-Malvales View MSA
124343226 5266 SBM View MSA
124249241 5268 Malvidae View MSA
124061773 5270 Rosid View MSA
123737700 5271 Pentapetalae View MSA
122790553 5272 Eudicot View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain